The 2.0 version of rSNPBase

Variant report

Variant rs10754423
Chromosome Location chr1:120334167-120334168
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:120324800-120335000 Enhancers Fetal Intestine Large intestine
2 chr1:120324800-120335000 Enhancers Fetal Intestine Small intestine
3 chr1:120327200-120336400 Weak transcription Rectal Smooth Muscle rectum
4 chr1:120327400-120337000 Weak transcription Colonic Mucosa Colon
5 chr1:120328400-120336800 Weak transcription Fetal Muscle Trunk muscle
6 chr1:120330000-120334400 Enhancers Duodenum Mucosa Duodenum
7 chr1:120330200-120336000 Weak transcription Esophagus oesophagus
8 chr1:120330600-120336000 Weak transcription Fetal Muscle Leg muscle
9 chr1:120330800-120335800 Weak transcription Fetal Lung lung
10 chr1:120331000-120335800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:120331000-120337800 Weak transcription HMEC breast
12 chr1:120331200-120336200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr1:120332600-120334600 Enhancers Rectal Mucosa Donor 31 rectum
14 chr1:120332800-120334200 Flanking Active TSS Liver Liver
15 chr1:120332800-120334200 Enhancers Small Intestine intestine
16 chr1:120332800-120334400 Enhancers Stomach Mucosa stomach
17 chr1:120332800-120334800 Enhancers HepG2 liver
18 chr1:120332800-120341600 Enhancers Fetal Stomach stomach
19 chr1:120333000-120334800 Enhancers Fetal Kidney kidney
20 chr1:120333200-120334600 Enhancers Placenta Placenta
21 chr1:120333600-120334400 Enhancers Gastric stomach
22 chr1:120333600-120334400 Enhancers Sigmoid Colon Sigmoid Colon
23 chr1:120333600-120334600 Enhancers Rectal Mucosa Donor 29 rectum
24 chr1:120333800-120334600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:120333800-120336000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:120333800-120339200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:120334000-120334200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:120334000-120334800 Enhancers Stomach Smooth Muscle stomach
29 chr1:120334000-120336000 Weak transcription Pancreas Pancrea
30 chr1:120334000-120338400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:120334000-120339400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015