The 2.0 version of rSNPBase

Variant report

Variant rs10923904
Chromosome Location chr1:120328603-120328604
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:120321600-120330800 Enhancers Placenta Placenta
2 chr1:120323600-120329400 Enhancers Liver Liver
3 chr1:120323800-120332600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:120324600-120328800 Enhancers HepG2 liver
5 chr1:120324800-120328800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:120324800-120329000 Enhancers Fetal Stomach stomach
7 chr1:120324800-120330600 Enhancers Fetal Muscle Leg muscle
8 chr1:120324800-120330800 Enhancers Primary monocytes fromperipheralblood blood
9 chr1:120324800-120331000 Enhancers Monocytes-CD14+_RO01746 blood
10 chr1:120324800-120335000 Enhancers Fetal Intestine Large intestine
11 chr1:120324800-120335000 Enhancers Fetal Intestine Small intestine
12 chr1:120325000-120328800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:120325000-120328800 Enhancers Fetal Lung lung
14 chr1:120325200-120331000 Enhancers HMEC breast
15 chr1:120325400-120330000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:120325400-120331600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:120325600-120333600 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr1:120326400-120329000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:120326600-120330400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:120326800-120330000 Weak transcription Pancreas Pancrea
21 chr1:120326800-120330600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:120327000-120330400 Weak transcription Fetal Kidney kidney
23 chr1:120327200-120329400 Weak transcription Small Intestine intestine
24 chr1:120327200-120330000 Weak transcription Duodenum Mucosa Duodenum
25 chr1:120327200-120336400 Weak transcription Rectal Smooth Muscle rectum
26 chr1:120327400-120329400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:120327400-120337000 Weak transcription Colonic Mucosa Colon
28 chr1:120328000-120329000 Enhancers Gastric stomach
29 chr1:120328000-120331000 Enhancers Stomach Mucosa stomach
30 chr1:120328000-120331200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr1:120328200-120328800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:120328200-120328800 Enhancers Primary neutrophils fromperipheralblood blood
33 chr1:120328200-120329400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:120328200-120331200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:120328400-120329400 Weak transcription Esophagus oesophagus
36 chr1:120328400-120329400 Weak transcription Lung lung
37 chr1:120328400-120329400 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr1:120328400-120330200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:120328400-120330800 Enhancers NHEK skin
40 chr1:120328400-120336800 Weak transcription Fetal Muscle Trunk muscle
41 chr1:120328600-120328800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:120328600-120328800 Enhancers Stomach Smooth Muscle stomach
43 chr1:120328600-120330000 Weak transcription HSMMtube muscle
44 chr1:120328600-120333200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015