The 2.0 version of rSNPBase

Variant report

Variant rs1441006
Chromosome Location chr1:120330447-120330448
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:120321600-120330800 Enhancers Placenta Placenta
2 chr1:120323800-120332600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:120324800-120330600 Enhancers Fetal Muscle Leg muscle
4 chr1:120324800-120330800 Enhancers Primary monocytes fromperipheralblood blood
5 chr1:120324800-120331000 Enhancers Monocytes-CD14+_RO01746 blood
6 chr1:120324800-120335000 Enhancers Fetal Intestine Large intestine
7 chr1:120324800-120335000 Enhancers Fetal Intestine Small intestine
8 chr1:120325200-120331000 Enhancers HMEC breast
9 chr1:120325400-120331600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:120325600-120333600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:120326800-120330600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:120327200-120336400 Weak transcription Rectal Smooth Muscle rectum
13 chr1:120327400-120337000 Weak transcription Colonic Mucosa Colon
14 chr1:120328000-120331000 Enhancers Stomach Mucosa stomach
15 chr1:120328000-120331200 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr1:120328200-120331200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:120328400-120330800 Enhancers NHEK skin
18 chr1:120328400-120336800 Weak transcription Fetal Muscle Trunk muscle
19 chr1:120328600-120333200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:120328800-120333200 Weak transcription Stomach Smooth Muscle stomach
21 chr1:120328800-120333600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:120329000-120332800 Weak transcription Fetal Stomach stomach
23 chr1:120329400-120330600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:120329400-120330600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:120329400-120331200 Enhancers Rectal Mucosa Donor 31 rectum
26 chr1:120329600-120333600 Weak transcription Gastric stomach
27 chr1:120330000-120330600 Enhancers Pancreas Pancrea
28 chr1:120330000-120330800 Enhancers Primary neutrophils fromperipheralblood blood
29 chr1:120330000-120330800 Enhancers HSMMtube muscle
30 chr1:120330000-120331000 Enhancers Osteobl bone
31 chr1:120330000-120331200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:120330000-120331200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:120330000-120331200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:120330000-120331200 Enhancers HSMM muscle
35 chr1:120330000-120334400 Enhancers Duodenum Mucosa Duodenum
36 chr1:120330200-120330800 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr1:120330200-120330800 Enhancers Fetal Lung lung
38 chr1:120330200-120331200 Enhancers HepG2 liver
39 chr1:120330200-120332800 Weak transcription Small Intestine intestine
40 chr1:120330200-120333600 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:120330200-120336000 Weak transcription Esophagus oesophagus
42 chr1:120330400-120331000 Enhancers Liver Liver
43 chr1:120330400-120331000 Enhancers Duodenum Smooth Muscle Duodenum
44 chr1:120330400-120331200 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015