The 2.0 version of rSNPBase

Variant report

Variant rs4659237
Chromosome Location chr1:120336278-120336279
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:120327200-120336400 Weak transcription Rectal Smooth Muscle rectum
2 chr1:120327400-120337000 Weak transcription Colonic Mucosa Colon
3 chr1:120328400-120336800 Weak transcription Fetal Muscle Trunk muscle
4 chr1:120331000-120337800 Weak transcription HMEC breast
5 chr1:120332800-120341600 Enhancers Fetal Stomach stomach
6 chr1:120333800-120339200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:120334000-120338400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:120334000-120339400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:120334200-120338000 Weak transcription Small Intestine intestine
10 chr1:120334400-120336400 Weak transcription Gastric stomach
11 chr1:120334400-120337000 Weak transcription Duodenum Mucosa Duodenum
12 chr1:120334600-120337000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:120334600-120337000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:120334600-120337800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:120334800-120337000 Weak transcription Liver Liver
16 chr1:120334800-120337400 Weak transcription Fetal Kidney kidney
17 chr1:120335800-120336400 Enhancers Fetal Lung lung
18 chr1:120335800-120336400 Enhancers Stomach Smooth Muscle stomach
19 chr1:120335800-120338800 Enhancers Duodenum Smooth Muscle Duodenum
20 chr1:120336000-120336400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:120336000-120336400 Enhancers Fetal Intestine Small intestine
22 chr1:120336000-120336600 Enhancers Esophagus oesophagus
23 chr1:120336000-120336600 Enhancers Placenta Placenta
24 chr1:120336000-120336800 Genic enhancers Pancreas Pancrea
25 chr1:120336000-120338600 Enhancers Fetal Muscle Leg muscle
26 chr1:120336000-120338800 Enhancers Fetal Intestine Large intestine
27 chr1:120336000-120338800 Enhancers Stomach Mucosa stomach
28 chr1:120336000-120340200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:120336000-120341600 Weak transcription Primary T cells from cord blood blood
30 chr1:120336000-120349400 Weak transcription Right Atrium heart
31 chr1:120336200-120336400 Active TSS Spleen Spleen
32 chr1:120336200-120338800 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:120336200-120339600 Enhancers Colon Smooth Muscle Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015