The 2.0 version of rSNPBase

Variant report

Variant rs6698813
Chromosome Location chr1:120336182-120336183
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:120327200-120336400 Weak transcription Rectal Smooth Muscle rectum
2 chr1:120327400-120337000 Weak transcription Colonic Mucosa Colon
3 chr1:120328400-120336800 Weak transcription Fetal Muscle Trunk muscle
4 chr1:120331000-120337800 Weak transcription HMEC breast
5 chr1:120331200-120336200 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:120332800-120341600 Enhancers Fetal Stomach stomach
7 chr1:120333800-120339200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:120334000-120338400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:120334000-120339400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:120334200-120338000 Weak transcription Small Intestine intestine
11 chr1:120334400-120336400 Weak transcription Gastric stomach
12 chr1:120334400-120337000 Weak transcription Duodenum Mucosa Duodenum
13 chr1:120334600-120337000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:120334600-120337000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:120334600-120337800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:120334800-120337000 Weak transcription Liver Liver
17 chr1:120334800-120337400 Weak transcription Fetal Kidney kidney
18 chr1:120335800-120336400 Enhancers Fetal Lung lung
19 chr1:120335800-120336400 Enhancers Stomach Smooth Muscle stomach
20 chr1:120335800-120338800 Enhancers Duodenum Smooth Muscle Duodenum
21 chr1:120336000-120336400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:120336000-120336400 Enhancers Fetal Intestine Small intestine
23 chr1:120336000-120336600 Enhancers Esophagus oesophagus
24 chr1:120336000-120336600 Enhancers Placenta Placenta
25 chr1:120336000-120336800 Genic enhancers Pancreas Pancrea
26 chr1:120336000-120338600 Enhancers Fetal Muscle Leg muscle
27 chr1:120336000-120338800 Enhancers Fetal Intestine Large intestine
28 chr1:120336000-120338800 Enhancers Stomach Mucosa stomach
29 chr1:120336000-120340200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:120336000-120341600 Weak transcription Primary T cells from cord blood blood
31 chr1:120336000-120349400 Weak transcription Right Atrium heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015