Variant report

Variant	rs10785995
Chromosome Location	chr10:92944224-92944225
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10437467	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10437468	0.86[CEU][hapmap];0.83[CHB][hapmap];0.91[YRI][hapmap];0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10437469	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10437470	0.81[CEU][hapmap];0.83[CHB][hapmap];0.80[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10881903	0.81[AMR][1000 genomes]
rs11186491	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11186492	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11186493	0.81[CEU][hapmap];0.83[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12244088	0.88[EUR][1000 genomes]
rs12416166	0.81[CEU][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12416484	0.81[CEU][hapmap];0.83[CHB][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12416527	0.85[CEU][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12768855	0.81[CEU][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12773770	0.81[CEU][hapmap]
rs12778694	0.81[CEU][hapmap];0.82[JPT][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2420802	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7100396	0.81[CEU][hapmap];0.83[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7902517	0.81[CEU][hapmap];0.83[CHB][hapmap];0.83[JPT][hapmap];0.91[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7902531	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7902769	0.86[CEU][hapmap];0.83[CHB][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7906291	0.83[CHB][hapmap];0.80[JPT][hapmap];0.83[EUR][1000 genomes]
rs7911631	0.81[CEU][hapmap];0.83[CHB][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92924800-92944400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr10:92924800-92944600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr10:92924800-92944600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr10:92924800-92945200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr10:92926600-92944600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr10:92926800-92945200	Weak transcription	Fetal Heart	heart
7	chr10:92928400-92944600	Weak transcription	Spleen	Spleen
8	chr10:92931600-92944600	Weak transcription	Psoas Muscle	Psoas
9	chr10:92932200-92957800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr10:92932600-92944600	Weak transcription	Right Ventricle	heart
11	chr10:92932800-92944600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr10:92934800-92946400	Weak transcription	Primary T cells from cord blood	blood
13	chr10:92935200-92944800	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr10:92935400-92948400	Weak transcription	Primary B cells from peripheral blood	blood
15	chr10:92940800-92945200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr10:92940800-92947400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr10:92941400-92945000	Weak transcription	Aorta	Aorta
18	chr10:92941600-92945400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
19	chr10:92942000-92944600	Weak transcription	Fetal Intestine Small	intestine
20	chr10:92942200-92949400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr10:92943600-92944600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr10:92943800-92944600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr10:92943800-92947400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
24	chr10:92943800-92948600	Weak transcription	Brain Angular Gyrus	brain
25	chr10:92944000-92947600	Enhancers	Dnd41	blood
26	chr10:92944000-92951800	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr10:92944200-92944400	Enhancers	Rectal Smooth Muscle	rectum
28	chr10:92944200-92945000	Weak transcription	Primary T helper cells PMA-I stimulated	--
29	chr10:92944200-92945800	Enhancers	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links