The 2.0 version of rSNPBase

Variant report

Variant rs2420802
Chromosome Location chr10:92955289-92955290
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:92932200-92957800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr10:92945400-92958000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr10:92945600-92958200 Weak transcription Spleen Spleen
4 chr10:92946200-92957800 Weak transcription Primary T cells fromperipheralblood blood
5 chr10:92947400-92959600 Weak transcription Thymus Thymus
6 chr10:92948400-92958000 Enhancers Primary T helper cells PMA-I stimulated --
7 chr10:92949000-92958400 Weak transcription Gastric stomach
8 chr10:92950200-92958000 Weak transcription Liver Liver
9 chr10:92950200-92958400 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr10:92950400-92958000 Weak transcription Fetal Thymus thymus
11 chr10:92950400-92960400 Weak transcription A549 lung
12 chr10:92950600-92960800 Weak transcription Stomach Smooth Muscle stomach
13 chr10:92950800-92958200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr10:92951400-92957800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr10:92951600-92955600 Weak transcription Right Atrium heart
16 chr10:92951600-92956800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr10:92951600-92957000 Weak transcription Small Intestine intestine
18 chr10:92951600-92957000 Weak transcription NH-A brain
19 chr10:92951600-92958000 Weak transcription Ovary ovary
20 chr10:92951600-92958000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr10:92951600-92958200 Weak transcription Esophagus oesophagus
22 chr10:92951600-92958400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr10:92951600-92958400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr10:92951800-92955600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr10:92951800-92955800 Weak transcription Primary B cells from peripheral blood blood
26 chr10:92951800-92957200 Weak transcription Adipose Nuclei Adipose
27 chr10:92951800-92958200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:92951800-92958200 Weak transcription Brain Angular Gyrus brain
29 chr10:92952000-92957800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr10:92952200-92958200 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr10:92952400-92955600 Weak transcription Brain Hippocampus Middle brain
32 chr10:92952400-92961000 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr10:92952600-92958200 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr10:92952800-92956600 Weak transcription Brain Substantia Nigra brain
35 chr10:92953000-92955600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr10:92953000-92955800 Weak transcription Brain Cingulate Gyrus brain
37 chr10:92953000-92956400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr10:92953400-92958000 Weak transcription Psoas Muscle Psoas
39 chr10:92953400-92958200 Weak transcription Lung lung
40 chr10:92953800-92956600 Weak transcription Brain Anterior Caudate brain
41 chr10:92954000-92955600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr10:92954000-92955600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr10:92954200-92955400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr10:92954200-92955400 Weak transcription Left Ventricle heart
45 chr10:92954200-92955600 Weak transcription K562 blood
46 chr10:92954200-92958000 Weak transcription Primary T cells from cord blood blood
47 chr10:92954400-92956400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr10:92954400-92956400 Enhancers GM12878-XiMat blood
49 chr10:92954400-92958000 Weak transcription Primary B cells from cord blood blood
50 chr10:92954600-92955600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015