Variant report

Variant	rs7911631
Chromosome Location	chr10:92948202-92948203
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:92947556..92949360-chr10:92979346..92981559,2	K562	blood:

Variant related genes	Relation type
ENSG00000180628	Chromatin interaction

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10437467	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10437468	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.92[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10437469	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10437470	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10785995	0.81[CEU][hapmap];0.83[CHB][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10881903	0.88[AMR][1000 genomes]
rs11186491	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11186492	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11186493	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11186501	0.82[AMR][1000 genomes]
rs12220699	0.82[AMR][1000 genomes]
rs12244088	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12416166	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12416484	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12416527	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12768855	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12772535	0.84[EUR][1000 genomes]
rs12773770	1.00[CEU][hapmap]
rs12778694	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2420802	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3858285	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs7100396	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7902517	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.91[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7902531	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7902769	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7906291	0.88[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92932200-92957800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr10:92935400-92948400	Weak transcription	Primary B cells from peripheral blood	blood
3	chr10:92942200-92949400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
4	chr10:92943800-92948600	Weak transcription	Brain Angular Gyrus	brain
5	chr10:92944000-92951800	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr10:92944600-92951200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:92945000-92951200	Weak transcription	Primary hematopoietic stem cells	blood
8	chr10:92945200-92948400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr10:92945200-92948400	Weak transcription	Esophagus	oesophagus
10	chr10:92945200-92951000	Weak transcription	Ovary	ovary
11	chr10:92945400-92948400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr10:92945400-92948600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr10:92945400-92948600	Weak transcription	Gastric	stomach
14	chr10:92945400-92948800	Weak transcription	Brain Anterior Caudate	brain
15	chr10:92945400-92949800	Weak transcription	Colon Smooth Muscle	Colon
16	chr10:92945400-92951000	Weak transcription	Pancreas	Pancrea
17	chr10:92945400-92958000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr10:92945600-92948600	Weak transcription	Aorta	Aorta
19	chr10:92945600-92949800	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr10:92945600-92949800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr10:92945600-92949800	Weak transcription	Right Atrium	heart
22	chr10:92945600-92949800	Weak transcription	HSMM	muscle
23	chr10:92945600-92949800	Weak transcription	NHLF	lung
24	chr10:92945600-92950000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
25	chr10:92945600-92950200	Weak transcription	Rectal Smooth Muscle	rectum
26	chr10:92945600-92950400	Weak transcription	HSMMtube	muscle
27	chr10:92945600-92952000	Weak transcription	Fetal Intestine Small	intestine
28	chr10:92945600-92958200	Weak transcription	Spleen	Spleen
29	chr10:92945800-92948400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr10:92945800-92948600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr10:92945800-92949000	Weak transcription	NHDF-Ad	bronchial
32	chr10:92945800-92949600	Weak transcription	Osteobl	bone
33	chr10:92945800-92949800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr10:92945800-92949800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr10:92945800-92949800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr10:92945800-92949800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr10:92945800-92949800	Weak transcription	Brain Cingulate Gyrus	brain
38	chr10:92945800-92949800	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr10:92945800-92949800	Weak transcription	Left Ventricle	heart
40	chr10:92945800-92949800	Weak transcription	Skeletal Muscle Female	skeletal muscle
41	chr10:92945800-92950000	Weak transcription	NH-A	brain
42	chr10:92945800-92950200	Weak transcription	Fetal Heart	heart
43	chr10:92945800-92950200	Weak transcription	Stomach Smooth Muscle	stomach
44	chr10:92945800-92952800	Weak transcription	Lung	lung
45	chr10:92945800-92953000	Weak transcription	Right Ventricle	heart
46	chr10:92946000-92949600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr10:92946200-92949800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr10:92946200-92949800	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr10:92946200-92950000	Weak transcription	A549	lung
50	chr10:92946200-92950800	Weak transcription	Duodenum Smooth Muscle	Duodenum

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