Variant report

Variant	rs10836147
Chromosome Location	chr11:34030069-34030070
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34029956..34035803-chr11:34072103..34076494,6	K562	blood:
2	chr11:34020188..34022737-chr11:34029485..34031356,2	K562	blood:

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10082562	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10742311	0.81[EUR][1000 genomes]
rs10768043	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10836144	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10836145	1.00[ASN][1000 genomes]
rs10836146	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10836149	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11032481	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11032482	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11032485	1.00[ASN][1000 genomes]
rs11032486	0.90[ASN][1000 genomes]
rs11032487	1.00[ASN][1000 genomes]
rs11032489	0.90[ASN][1000 genomes]
rs11032491	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12272003	0.88[ASN][1000 genomes]
rs12277616	0.90[ASN][1000 genomes]
rs12285326	0.86[ASN][1000 genomes]
rs12292366	0.88[ASN][1000 genomes]
rs12576882	1.00[ASN][1000 genomes]
rs12577490	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12789531	0.90[ASN][1000 genomes]
rs12799109	0.99[ASN][1000 genomes]
rs2139177	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3852514	0.80[EUR][1000 genomes]
rs4348871	0.80[EUR][1000 genomes]
rs7120520	0.82[EUR][1000 genomes]
rs7121633	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7122747	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7952389	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34026600-34035000	Weak transcription	Fetal Intestine Large	intestine
2	chr11:34029000-34036000	Weak transcription	Duodenum Mucosa	Duodenum

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