Variant report

Variant	rs10742311
Chromosome Location	chr11:34054939-34054940
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:34052945..34055734-chr11:34073263..34075242,3	K562	blood:
2	chr11:34053961..34056331-chr11:34057255..34060788,3	MCF-7	breast:
3	chr11:34054096..34055825-chr11:34072849..34075469,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10768043	0.81[EUR][1000 genomes]
rs10768046	0.84[ASN][1000 genomes]
rs10836144	0.80[EUR][1000 genomes]
rs10836146	0.82[EUR][1000 genomes]
rs10836147	0.81[EUR][1000 genomes]
rs10836148	0.87[ASN][1000 genomes]
rs10836149	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10836152	0.98[ASN][1000 genomes]
rs11032481	0.82[EUR][1000 genomes]
rs11032482	0.81[EUR][1000 genomes]
rs11032491	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11032498	0.98[ASN][1000 genomes]
rs11032499	0.98[ASN][1000 genomes]
rs11032500	1.00[ASN][1000 genomes]
rs11032502	0.98[ASN][1000 genomes]
rs11032503	0.98[ASN][1000 genomes]
rs11032504	0.98[ASN][1000 genomes]
rs12272149	0.98[ASN][1000 genomes]
rs12272859	0.87[ASN][1000 genomes]
rs12275094	0.98[ASN][1000 genomes]
rs12278727	0.98[ASN][1000 genomes]
rs12279034	1.00[ASN][1000 genomes]
rs12281014	0.99[ASN][1000 genomes]
rs12289965	0.84[ASN][1000 genomes]
rs12290124	0.94[ASN][1000 genomes]
rs12291499	0.98[ASN][1000 genomes]
rs12417443	0.98[ASN][1000 genomes]
rs12418368	0.98[ASN][1000 genomes]
rs12577490	0.81[EUR][1000 genomes]
rs12788758	0.98[ASN][1000 genomes]
rs12789371	0.98[ASN][1000 genomes]
rs12803207	0.98[ASN][1000 genomes]
rs12803608	0.98[ASN][1000 genomes]
rs12808425	0.98[ASN][1000 genomes]
rs1518918	0.98[ASN][1000 genomes]
rs2139177	0.81[EUR][1000 genomes]
rs2421458	0.98[ASN][1000 genomes]
rs2421569	1.00[ASN][1000 genomes]
rs3852514	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3864880	0.98[ASN][1000 genomes]
rs4348871	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4363563	0.97[ASN][1000 genomes]
rs4497383	0.95[ASN][1000 genomes]
rs4756099	0.98[ASN][1000 genomes]
rs61880366	0.97[ASN][1000 genomes]
rs7120520	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7121633	0.82[EUR][1000 genomes]
rs7122747	0.81[EUR][1000 genomes]
rs7935684	0.98[ASN][1000 genomes]
rs7935695	0.98[ASN][1000 genomes]
rs7935809	0.98[ASN][1000 genomes]
rs7950733	0.97[ASN][1000 genomes]
rs7952389	0.80[EUR][1000 genomes]
rs9787970	0.85[ASN][1000 genomes]
rs9787972	0.84[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34050400-34055800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:34050600-34057800	Weak transcription	Fetal Intestine Large	intestine
3	chr11:34052200-34055600	Weak transcription	HMEC	breast
4	chr11:34053200-34055000	Weak transcription	Placenta	Placenta
5	chr11:34053200-34055600	Weak transcription	NHEK	skin

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