Variant report

Variant	rs12418368
Chromosome Location	chr11:34050532-34050533
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34050521..34052924-chr11:34062931..34064772,2	K562	blood:
2	chr11:34049427..34054146-chr11:34058279..34060796,4	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10742311	0.98[ASN][1000 genomes]
rs10768046	0.85[ASN][1000 genomes]
rs10836148	0.88[ASN][1000 genomes]
rs10836149	0.88[ASN][1000 genomes]
rs10836152	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11032487	0.81[EUR][1000 genomes]
rs11032491	0.86[ASN][1000 genomes]
rs11032498	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11032499	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11032500	0.80[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs11032502	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032503	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032504	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12272149	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12272859	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12275094	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12278727	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12279034	0.80[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs12281014	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12289965	0.85[ASN][1000 genomes]
rs12290124	0.92[ASN][1000 genomes]
rs12291499	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12417443	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12788758	1.00[ASN][1000 genomes]
rs12789371	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12803207	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12803608	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12808425	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1518918	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs2421458	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs2421569	0.80[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs3852514	0.97[ASN][1000 genomes]
rs3864880	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4348871	0.96[ASN][1000 genomes]
rs4363563	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4497383	0.94[ASN][1000 genomes]
rs4756099	0.99[ASN][1000 genomes]
rs61880366	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7120520	0.98[ASN][1000 genomes]
rs7935684	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7935695	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7935809	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7950733	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9787970	0.87[ASN][1000 genomes]
rs9787972	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34048800-34050600	Enhancers	Fetal Intestine Small	intestine
2	chr11:34048800-34052400	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr11:34049000-34050600	Enhancers	Fetal Intestine Large	intestine
4	chr11:34049000-34050600	Enhancers	Rectal Mucosa Donor 31	rectum
5	chr11:34049200-34050600	Enhancers	Placenta	Placenta
6	chr11:34049200-34051600	Enhancers	Stomach Mucosa	stomach
7	chr11:34049400-34052400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr11:34049600-34050800	Weak transcription	Aorta	Aorta
9	chr11:34049600-34051200	Enhancers	Fetal Brain Male	brain
10	chr11:34050000-34050600	Enhancers	Esophagus	oesophagus
11	chr11:34050000-34052600	Enhancers	NHEK	skin
12	chr11:34050200-34051400	Weak transcription	Duodenum Mucosa	Duodenum
13	chr11:34050200-34051800	Weak transcription	Colonic Mucosa	Colon
14	chr11:34050200-34052000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr11:34050200-34052000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr11:34050400-34051000	Enhancers	HepG2	liver
17	chr11:34050400-34051200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr11:34050400-34051400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr11:34050400-34055800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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