Variant report

Variant	rs12275094
Chromosome Location	chr11:34061353-34061354
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34060665..34063462-chr11:34065111..34067418,2	MCF-7	breast:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10742311	0.98[ASN][1000 genomes]
rs10768046	0.82[ASN][1000 genomes]
rs10836148	0.85[ASN][1000 genomes]
rs10836149	0.85[ASN][1000 genomes]
rs10836152	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11032491	0.83[ASN][1000 genomes]
rs11032498	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11032499	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11032500	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11032502	1.00[ASN][1000 genomes]
rs11032503	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11032504	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12272149	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12272859	0.85[ASN][1000 genomes]
rs12278727	0.97[ASN][1000 genomes]
rs12279034	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12281014	0.80[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs12289965	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12290124	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12291499	0.97[ASN][1000 genomes]
rs12417443	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12418368	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12788758	0.99[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12789371	1.00[ASN][1000 genomes]
rs12803207	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12803608	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12808425	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1518918	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421458	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421569	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3852514	1.00[ASN][1000 genomes]
rs3864880	0.99[ASN][1000 genomes]
rs4348871	0.99[ASN][1000 genomes]
rs4363563	0.80[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4497383	0.97[ASN][1000 genomes]
rs4756099	0.96[ASN][1000 genomes]
rs61880366	0.80[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs7120520	0.98[ASN][1000 genomes]
rs7935684	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7935695	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7935809	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7950733	0.95[ASN][1000 genomes]
rs9787970	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9787972	0.82[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34056200-34066200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:34059600-34062000	Weak transcription	Placenta	Placenta
3	chr11:34061200-34066600	Weak transcription	HUVEC	blood vessel

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