Variant report

Variant	rs10836148
Chromosome Location	chr11:34041840-34041841
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:34034770..34037468-chr11:34039227..34043308,3	K562	blood:
2	chr11:34040788..34042322-chr11:34047509..34050356,2	K562	blood:
3	chr11:34039994..34042109-chr11:34072195..34073736,2	K562	blood:

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10742311	0.87[ASN][1000 genomes]
rs10768046	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836149	1.00[ASN][1000 genomes]
rs10836152	0.85[ASN][1000 genomes]
rs10836156	0.88[CHB][hapmap];0.94[JPT][hapmap]
rs11032491	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs11032498	0.88[ASN][1000 genomes]
rs11032499	0.88[ASN][1000 genomes]
rs11032500	0.87[ASN][1000 genomes]
rs11032502	0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs11032503	0.85[ASN][1000 genomes]
rs11032504	0.85[ASN][1000 genomes]
rs12272149	0.88[ASN][1000 genomes]
rs12272859	1.00[ASN][1000 genomes]
rs12275094	0.85[ASN][1000 genomes]
rs12278727	0.88[ASN][1000 genomes]
rs12279034	0.87[ASN][1000 genomes]
rs12281014	0.86[ASN][1000 genomes]
rs12289965	0.97[ASN][1000 genomes]
rs12290124	0.81[ASN][1000 genomes]
rs12291499	0.88[ASN][1000 genomes]
rs12417443	0.85[ASN][1000 genomes]
rs12418368	0.88[ASN][1000 genomes]
rs12421526	0.89[CHB][hapmap];0.94[JPT][hapmap]
rs12788758	0.94[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs12789371	0.85[ASN][1000 genomes]
rs12803207	0.85[ASN][1000 genomes]
rs12803608	0.94[CHB][hapmap];0.93[JPT][hapmap];0.85[ASN][1000 genomes]
rs12808425	0.88[ASN][1000 genomes]
rs1518918	0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2421458	0.85[ASN][1000 genomes]
rs2421569	0.87[ASN][1000 genomes]
rs3852514	0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs3864880	0.94[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs4348871	0.85[ASN][1000 genomes]
rs4363563	0.89[ASN][1000 genomes]
rs4497383	0.94[CHB][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs4756099	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61880366	0.86[ASN][1000 genomes]
rs7120520	0.94[CHB][hapmap];0.94[JPT][hapmap];0.82[YRI][hapmap];0.87[ASN][1000 genomes]
rs7935684	0.85[ASN][1000 genomes]
rs7935695	0.85[ASN][1000 genomes]
rs7935809	0.85[ASN][1000 genomes]
rs7950733	0.90[ASN][1000 genomes]
rs9787970	0.98[ASN][1000 genomes]
rs9787972	0.97[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34041400-34048800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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