The 2.0 version of rSNPBase

Variant report

Variant rs10840104
Chromosome Location chr11:8690257-8690258
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8637000-8703200 Weak transcription Small Intestine intestine
2 chr11:8662600-8692000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr11:8664200-8692800 Weak transcription K562 blood
4 chr11:8664200-8700400 Weak transcription Stomach Mucosa stomach
5 chr11:8665800-8692600 Weak transcription Fetal Kidney kidney
6 chr11:8668200-8692400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr11:8668400-8692400 Weak transcription A549 lung
8 chr11:8669400-8693000 Weak transcription Primary hematopoietic stem cells blood
9 chr11:8669800-8691800 Weak transcription Duodenum Mucosa Duodenum
10 chr11:8670000-8693400 Weak transcription Colonic Mucosa Colon
11 chr11:8670000-8693600 Weak transcription Psoas Muscle Psoas
12 chr11:8670200-8692400 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr11:8670200-8692800 Weak transcription Left Ventricle heart
14 chr11:8670200-8692800 Weak transcription Ovary ovary
15 chr11:8670200-8693200 Weak transcription Fetal Muscle Trunk muscle
16 chr11:8670400-8690400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr11:8670400-8693200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:8670600-8692800 Weak transcription Primary B cells from cord blood blood
19 chr11:8671200-8691200 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr11:8671200-8693200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr11:8671400-8692400 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr11:8671600-8690400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr11:8671600-8690400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr11:8671600-8692400 Weak transcription Fetal Thymus thymus
25 chr11:8671600-8692600 Weak transcription Fetal Stomach stomach
26 chr11:8671600-8692600 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr11:8671600-8692600 Weak transcription Hela-S3 cervix
28 chr11:8671600-8692800 Weak transcription Lung lung
29 chr11:8671600-8693200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr11:8671600-8693400 Weak transcription Gastric stomach
31 chr11:8672000-8692800 Weak transcription Spleen Spleen
32 chr11:8672200-8692800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr11:8672400-8691800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr11:8672400-8692600 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr11:8672600-8690400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr11:8672600-8692400 Weak transcription Thymus Thymus
37 chr11:8672600-8693200 Weak transcription Esophagus oesophagus
38 chr11:8673800-8692400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr11:8673800-8692800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr11:8673800-8693400 Weak transcription Aorta Aorta
41 chr11:8674200-8692400 Weak transcription HSMMtube muscle
42 chr11:8674400-8690400 Weak transcription Muscle Satellite Cultured Cells --
43 chr11:8674400-8690600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr11:8674400-8691200 Weak transcription HMEC breast
45 chr11:8674400-8691800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr11:8674400-8693200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr11:8674400-8693200 Weak transcription Pancreas Pancrea
48 chr11:8674600-8692400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr11:8676400-8692400 Weak transcription GM12878-XiMat blood
50 chr11:8680200-8692400 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015