Variant report

Variant rs10882660
Chromosome Location chr10:97517949-97517950
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97515000-97518200 Active TSS Duodenum Smooth Muscle Duodenum
2 chr10:97515000-97518400 Active TSS Stomach Smooth Muscle stomach
3 chr10:97515200-97518200 Active TSS Duodenum Mucosa Duodenum
4 chr10:97515200-97518200 Active TSS GM12878-XiMat blood
5 chr10:97515200-97518400 Active TSS Brain Hippocampus Middle brain
6 chr10:97515200-97518600 Active TSS Rectal Mucosa Donor 29 rectum
7 chr10:97515400-97518200 Active TSS Primary T regulatory cells fromperipheralblood blood
8 chr10:97516000-97518400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr10:97516000-97518400 Weak transcription Lung lung
10 chr10:97516000-97519000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
11 chr10:97516000-97519200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr10:97516200-97518200 Weak transcription K562 blood
13 chr10:97516400-97518600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr10:97516600-97518200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr10:97516600-97518400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr10:97516600-97521400 Weak transcription H9 Cell Line embryonic stem cell
17 chr10:97516800-97518400 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr10:97516800-97521200 Weak transcription Left Ventricle heart
19 chr10:97516800-97524800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr10:97517000-97518400 Weak transcription H1 Cell Line embryonic stem cell
21 chr10:97517000-97518400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr10:97517000-97518400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr10:97517000-97519000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr10:97517200-97518200 Active TSS Primary hematopoietic stem cells blood
25 chr10:97517200-97518200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr10:97517200-97518200 Weak transcription Brain Substantia Nigra brain
27 chr10:97517200-97518200 Weak transcription Small Intestine intestine
28 chr10:97517200-97518400 Enhancers Cortex derived primary cultured neurospheres brain
29 chr10:97517200-97518400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr10:97517200-97518400 Weak transcription Brain Cingulate Gyrus brain
31 chr10:97517200-97518400 Weak transcription Esophagus oesophagus
32 chr10:97517200-97518400 Weak transcription Fetal Muscle Leg muscle
33 chr10:97517200-97518400 Weak transcription Right Atrium heart
34 chr10:97517200-97518800 Weak transcription Aorta Aorta
35 chr10:97517200-97519400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr10:97517200-97520200 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr10:97517200-97521200 Weak transcription Primary T cells from cord blood blood
38 chr10:97517200-97521400 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr10:97517400-97518400 Weak transcription Fetal Stomach stomach
40 chr10:97517400-97518400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr10:97517400-97518600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr10:97517400-97519200 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr10:97517400-97519800 Enhancers Colon Smooth Muscle Colon
44 chr10:97517400-97520000 Weak transcription Brain Anterior Caudate brain
45 chr10:97517600-97518000 Active TSS Primary B cells from cord blood blood
46 chr10:97517600-97518000 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr10:97517600-97518000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr10:97517600-97518000 Weak transcription HUVEC blood vessel
49 chr10:97517600-97518000 Active TSS Monocytes-CD14+_RO01746 blood
50 chr10:97517600-97518200 Weak transcription Skeletal Muscle Female skeletal muscle

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