The 2.0 version of rSNPBase

Variant report

Variant rs10931396
Chromosome Location chr2:189969853-189969854
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189922800-189980800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:189933000-189980200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:189941200-189975000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:189947600-189980800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:189948200-189980600 Weak transcription Placenta Placenta
6 chr2:189948600-189974800 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr2:189950800-189977800 Weak transcription Fetal Intestine Large intestine
8 chr2:189954800-189980400 Weak transcription Ovary ovary
9 chr2:189958200-189981000 Weak transcription Fetal Stomach stomach
10 chr2:189960200-189973800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:189960400-189974400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr2:189962200-189973600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:189962400-189995200 Weak transcription Aorta Aorta
14 chr2:189962600-189978800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:189962600-189980600 Weak transcription Fetal Muscle Leg muscle
16 chr2:189963000-189970800 Weak transcription NHLF lung
17 chr2:189963400-189970000 Weak transcription Adipose Nuclei Adipose
18 chr2:189963800-189973400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:189965200-189972600 Weak transcription NH-A brain
20 chr2:189966400-189974600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:189968200-189972600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:189968400-189972600 Weak transcription Fetal Lung lung
23 chr2:189968600-189977800 Weak transcription HSMMtube muscle
24 chr2:189968600-190012000 Weak transcription Fetal Muscle Trunk muscle
25 chr2:189968800-189973800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:189969000-189970000 Weak transcription Osteobl bone
27 chr2:189969000-189973400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr2:189969000-189980000 Weak transcription Stomach Smooth Muscle stomach
29 chr2:189969200-189970200 Enhancers Liver Liver
30 chr2:189969400-189970800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr2:189969600-189970000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:189969600-189970200 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr2:189969800-189970000 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr2:189969800-189970000 Enhancers Rectal Smooth Muscle rectum
35 chr2:189969800-189970200 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr2:189969800-189970200 Enhancers Primary T helper cells PMA-I stimulated --
37 chr2:189969800-189970200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:189969800-189970200 Enhancers Brain Angular Gyrus brain
39 chr2:189969800-189970200 Enhancers Colon Smooth Muscle Colon
40 chr2:189969800-189970200 Transcr. at gene 5' and 3' A549 lung
41 chr2:189969800-189970200 Enhancers HUVEC blood vessel
42 chr2:189969800-189971000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:189969800-189971000 Genic enhancers HSMM muscle
44 chr2:189969800-189972800 Genic enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015