The 2.0 version of rSNPBase

Variant report

Variant rs72906362
Chromosome Location chr2:189962702-189962703
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189895600-189965200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr2:189900800-189964400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:189922800-189980800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:189933000-189980200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr2:189936600-189969200 Weak transcription Liver Liver
6 chr2:189941200-189975000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:189947600-189980800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:189948200-189980600 Weak transcription Placenta Placenta
9 chr2:189948600-189974800 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr2:189950800-189977800 Weak transcription Fetal Intestine Large intestine
11 chr2:189954800-189980400 Weak transcription Ovary ovary
12 chr2:189958000-189968000 Weak transcription Stomach Smooth Muscle stomach
13 chr2:189958200-189981000 Weak transcription Fetal Stomach stomach
14 chr2:189959400-189963200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:189959600-189962800 Genic enhancers Muscle Satellite Cultured Cells --
16 chr2:189960200-189962800 Enhancers HUVEC blood vessel
17 chr2:189960200-189973800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr2:189960400-189974400 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr2:189960800-189962800 Weak transcription Fetal Lung lung
20 chr2:189960800-189967600 Weak transcription Fetal Muscle Trunk muscle
21 chr2:189961200-189963000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:189961200-189963400 Strong transcription Adipose Nuclei Adipose
23 chr2:189961400-189963200 Genic enhancers NHDF-Ad bronchial
24 chr2:189961600-189963000 Genic enhancers NHLF lung
25 chr2:189961600-189963800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:189961800-189963000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:189962200-189963000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr2:189962200-189964200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:189962200-189973600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:189962400-189962800 Weak transcription HSMMtube muscle
31 chr2:189962400-189962800 Enhancers Osteobl bone
32 chr2:189962400-189963600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:189962400-189965000 Genic enhancers A549 lung
34 chr2:189962400-189967600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr2:189962400-189995200 Weak transcription Aorta Aorta
36 chr2:189962600-189962800 Weak transcription Rectal Smooth Muscle rectum
37 chr2:189962600-189965200 Strong transcription NH-A brain
38 chr2:189962600-189967400 Strong transcription HSMM muscle
39 chr2:189962600-189969800 Weak transcription Colon Smooth Muscle Colon
40 chr2:189962600-189978800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:189962600-189980600 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015