Variant report

Variant rs7425816
Chromosome Location chr2:189960559-189960560
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189895600-189965200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr2:189896200-189962400 Weak transcription Left Ventricle heart
3 chr2:189900800-189964400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr2:189912400-189961600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr2:189922800-189980800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:189933000-189980200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr2:189936600-189969200 Weak transcription Liver Liver
8 chr2:189941200-189975000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:189942800-189961800 Weak transcription Aorta Aorta
10 chr2:189947200-189961200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr2:189947600-189961800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr2:189947600-189980800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:189948200-189980600 Weak transcription Placenta Placenta
14 chr2:189948600-189974800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr2:189950200-189961600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr2:189950800-189961400 Weak transcription Fetal Kidney kidney
17 chr2:189950800-189977800 Weak transcription Fetal Intestine Large intestine
18 chr2:189951800-189961400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr2:189952000-189961600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr2:189954800-189980400 Weak transcription Ovary ovary
21 chr2:189955800-189960600 Genic enhancers NHDF-Ad bronchial
22 chr2:189956800-189962600 Genic enhancers HSMM muscle
23 chr2:189957000-189961600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:189957400-189960800 Enhancers Fetal Lung lung
25 chr2:189958000-189961800 Weak transcription Fetal Intestine Small intestine
26 chr2:189958000-189962000 Genic enhancers A549 lung
27 chr2:189958000-189968000 Weak transcription Stomach Smooth Muscle stomach
28 chr2:189958200-189981000 Weak transcription Fetal Stomach stomach
29 chr2:189958400-189960800 Genic enhancers NHLF lung
30 chr2:189958400-189961000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr2:189958600-189960800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:189959400-189960600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:189959400-189960800 Genic enhancers NH-A brain
34 chr2:189959400-189961200 Genic enhancers Osteobl bone
35 chr2:189959400-189962200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr2:189959400-189962600 Strong transcription Fetal Muscle Leg muscle
37 chr2:189959400-189963200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:189959600-189960800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr2:189959600-189960800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr2:189959600-189960800 Enhancers Fetal Heart heart
41 chr2:189959600-189960800 Strong transcription Fetal Muscle Trunk muscle
42 chr2:189959600-189960800 Genic enhancers HSMMtube muscle
43 chr2:189959600-189962800 Genic enhancers Muscle Satellite Cultured Cells --
44 chr2:189960000-189961200 Weak transcription Adipose Nuclei Adipose
45 chr2:189960200-189962800 Enhancers HUVEC blood vessel
46 chr2:189960200-189973800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr2:189960400-189961000 Enhancers Rectal Smooth Muscle rectum
48 chr2:189960400-189961200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr2:189960400-189961600 Weak transcription Colon Smooth Muscle Colon
50 chr2:189960400-189961600 Enhancers Placenta Amnion Placenta Amnion

Quick Search:


  
Input of quick search could be:

what's new

Quick links