Variant report
| Variant | rs11006585 |
|---|---|
| Chromosome Location | chr10:61333281-61333282 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
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| No data |
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rSNPs within LD-proxies of this variant (count:28)
| rs_ID | r2[population] |
|---|---|
| rs10509110 | 0.99[ASN][1000 genomes] |
| rs10826317 | 0.88[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs10826322 | 0.99[ASN][1000 genomes] |
| rs10826323 | 0.99[ASN][1000 genomes] |
| rs11006576 | 0.99[ASN][1000 genomes] |
| rs11006590 | 0.86[CHB][hapmap] |
| rs11006595 | 0.99[ASN][1000 genomes] |
| rs11006597 | 0.99[ASN][1000 genomes] |
| rs11006608 | 0.89[ASN][1000 genomes] |
| rs11598299 | 1.00[CHB][hapmap];1.00[CHD][hapmap];0.80[GIH][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes] |
| rs11815662 | 0.92[ASN][1000 genomes] |
| rs11819306 | 0.92[ASN][1000 genomes] |
| rs11819752 | 0.92[ASN][1000 genomes] |
| rs16913818 | 0.99[ASN][1000 genomes] |
| rs16913821 | 0.99[ASN][1000 genomes] |
| rs1909635 | 0.99[ASN][1000 genomes] |
| rs1909638 | 0.99[ASN][1000 genomes] |
| rs3956825 | 0.92[ASN][1000 genomes] |
| rs4519044 | 0.99[ASN][1000 genomes] |
| rs4948235 | 0.95[CHB][hapmap];0.89[CHD][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs4948343 | 0.89[ASN][1000 genomes] |
| rs4948344 | 0.89[ASN][1000 genomes] |
| rs55957619 | 0.99[ASN][1000 genomes] |
| rs56083792 | 0.99[ASN][1000 genomes] |
| rs7077944 | 0.87[ASN][1000 genomes] |
| rs7914581 | 0.92[ASN][1000 genomes] |
| rs7921200 | 0.99[ASN][1000 genomes] |
| rs884665 | 0.95[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:61331400-61336200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
