Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10509110	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10826322	0.83[AFR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10826323	0.93[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs11006576	0.93[ASN][1000 genomes]
rs11006585	0.95[ASN][1000 genomes]
rs11006595	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs11006597	0.93[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs11006608	0.85[ASN][1000 genomes]
rs11598299	0.90[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs11815662	0.86[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs11819306	0.90[ASN][1000 genomes]
rs11819752	0.90[ASN][1000 genomes]
rs16913818	0.93[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs16913821	0.96[ASN][1000 genomes]
rs1909635	0.87[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs1909638	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3956825	0.88[ASN][1000 genomes]
rs4519044	0.88[AFR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4948235	0.83[ASN][1000 genomes]
rs4948343	0.85[ASN][1000 genomes]
rs4948344	0.85[ASN][1000 genomes]
rs55957619	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs56083792	0.96[ASN][1000 genomes]
rs7077944	0.83[ASN][1000 genomes]
rs7914581	0.90[ASN][1000 genomes]
rs7921200	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895565	chr10:61347537-61379398	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61345600-61353400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr10:61348400-61351200	Weak transcription	Rectal Mucosa Donor 31	rectum

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