Variant report

Variant	rs11020892
Chromosome Location	chr11:94404743-94404744
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10765692	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10831261	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10831264	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12285867	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12362413	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12362437	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12364020	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12365249	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12365323	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17607689	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1790233	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2509341	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4127395	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4127396	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs487078	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs492621	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs506926	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs561886	0.80[EUR][1000 genomes]
rs56412399	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs584225	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs60917421	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs674106	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs677244	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs677331	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7103955	1.00[ASN][1000 genomes]
rs7104326	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7110345	0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7115112	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7115977	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7119223	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7127260	0.93[ASN][1000 genomes]
rs7130432	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7131489	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73522217	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7927928	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7931634	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94395400-94410800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:94398600-94404800	Weak transcription	Fetal Muscle Leg	muscle
3	chr11:94400400-94409600	Weak transcription	K562	blood
4	chr11:94402800-94405000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr11:94403000-94406800	Weak transcription	Fetal Brain Male	brain
6	chr11:94403600-94405400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
7	chr11:94403800-94405400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
8	chr11:94403800-94407200	Weak transcription	Right Atrium	heart
9	chr11:94404000-94405600	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
10	chr11:94404200-94406000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
11	chr11:94404400-94404800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
12	chr11:94404400-94404800	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr11:94404400-94405600	Enhancers	HSMMtube	muscle
14	chr11:94404400-94413000	Enhancers	HMEC	breast
15	chr11:94404600-94405000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr11:94404600-94405000	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr11:94404600-94405000	Enhancers	Esophagus	oesophagus
18	chr11:94404600-94405000	Enhancers	Placenta Amnion	Placenta Amnion
19	chr11:94404600-94405200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr11:94404600-94405200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr11:94404600-94405200	Enhancers	Muscle Satellite Cultured Cells	--
22	chr11:94404600-94405200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr11:94404600-94405200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr11:94404600-94405200	ZNF genes & repeats	Gastric	stomach
25	chr11:94404600-94405400	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr11:94404600-94405400	Enhancers	Skeletal Muscle Female	skeletal muscle
27	chr11:94404600-94405400	Enhancers	NHEK	skin
28	chr11:94404600-94406000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr11:94404600-94406000	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr11:94404600-94406000	Enhancers	Psoas Muscle	Psoas
31	chr11:94404600-94406200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell

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