Variant report

Variant	rs17607689
Chromosome Location	chr11:94409196-94409197
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:94400559..94402615-chr11:94409133..94411401,2	K562	blood:
2	chr11:94401115..94403085-chr11:94408105..94410633,3	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10765692	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10831261	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10831264	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11020892	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12285867	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12362413	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12362437	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12364020	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12365249	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12365323	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16920846	0.93[YRI][hapmap]
rs1790233	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2509341	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4127395	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4127396	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs487078	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs492621	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs506926	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs561886	0.80[EUR][1000 genomes]
rs56412399	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs584225	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs60917421	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs674106	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs677244	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs677331	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7103955	0.98[ASN][1000 genomes]
rs7104326	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7110345	0.90[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7115112	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7115977	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7119223	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7127260	0.90[ASN][1000 genomes]
rs7130432	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7131489	0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73522217	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7927928	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7931634	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94395400-94410800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:94400400-94409600	Weak transcription	K562	blood
3	chr11:94404400-94413000	Enhancers	HMEC	breast
4	chr11:94405000-94410400	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr11:94405200-94410600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:94405400-94415600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:94406200-94411600	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:94406400-94411200	Weak transcription	Aorta	Aorta
9	chr11:94406400-94411200	Enhancers	NHEK	skin
10	chr11:94406600-94411200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr11:94406600-94411600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr11:94406600-94412400	Enhancers	Psoas Muscle	Psoas
13	chr11:94406800-94409200	Enhancers	Fetal Brain Male	brain
14	chr11:94406800-94413000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr11:94407000-94409600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr11:94407000-94410800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr11:94407200-94412800	Enhancers	Fetal Intestine Large	intestine
18	chr11:94407400-94412600	Enhancers	Fetal Intestine Small	intestine
19	chr11:94407600-94409600	Enhancers	Fetal Brain Female	brain
20	chr11:94408200-94412400	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr11:94408800-94413000	Enhancers	Esophagus	oesophagus

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