Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15957587..15959918-chr11:15968473..15970708,2	K562	blood:
2	chr11:15969372..15972856-chr11:15973878..15977579,3	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10160737	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10458876	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10832532	0.84[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10832533	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10832536	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832537	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11023779	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11023783	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11023787	0.84[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11023789	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11023790	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11023792	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023794	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023795	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11023798	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12226315	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12276616	1.00[ASN][1000 genomes]
rs16932318	0.87[ASN][1000 genomes]
rs7111730	1.00[ASN][1000 genomes]
rs7948172	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs965631	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832073	chr11:15822409-15984078	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832074	chr11:15927105-16100772	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15963000-15985800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:15969200-15970200	Enhancers	HepG2	liver
3	chr11:15969200-15970600	Enhancers	Liver	Liver

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