Variant report

Variant rs11084189
Chromosome Location chr19:53237327-53237328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53221000-53237400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:53228400-53237400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:53231000-53237400 Weak transcription Colonic Mucosa Colon
4 chr19:53231200-53237400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr19:53231800-53237400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr19:53231800-53237400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr19:53231800-53237400 Weak transcription Fetal Muscle Trunk muscle
8 chr19:53231800-53237400 Weak transcription Gastric stomach
9 chr19:53231800-53237400 Weak transcription Left Ventricle heart
10 chr19:53231800-53237600 Weak transcription Ovary ovary
11 chr19:53234600-53237400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr19:53235200-53237600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr19:53235800-53237400 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr19:53236000-53237400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr19:53236000-53237600 Enhancers Small Intestine intestine
16 chr19:53236200-53237400 Enhancers Primary B cells from peripheral blood blood
17 chr19:53236400-53237400 Enhancers Fetal Brain Male brain
18 chr19:53236400-53237600 Flanking Active TSS Dnd41 blood
19 chr19:53236600-53237400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr19:53236600-53237400 Enhancers Primary monocytes fromperipheralblood blood
21 chr19:53236600-53237400 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr19:53236600-53237400 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr19:53236600-53237400 Enhancers Brain Substantia Nigra brain
24 chr19:53236600-53237400 Enhancers Colon Smooth Muscle Colon
25 chr19:53236600-53237400 Enhancers Esophagus oesophagus
26 chr19:53236600-53237400 Enhancers Fetal Heart heart
27 chr19:53236600-53237400 Enhancers Fetal Muscle Leg muscle
28 chr19:53236600-53237400 Enhancers Fetal Thymus thymus
29 chr19:53236600-53237400 Enhancers Pancreas Pancrea
30 chr19:53236600-53237400 Enhancers Placenta Amnion Placenta Amnion
31 chr19:53236600-53237400 Enhancers Psoas Muscle Psoas
32 chr19:53236600-53237400 Enhancers Right Ventricle heart
33 chr19:53236600-53237400 Enhancers K562 blood
34 chr19:53236600-53237600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
35 chr19:53236600-53237600 Enhancers Lung lung
36 chr19:53236600-53237600 Enhancers Spleen Spleen
37 chr19:53236600-53238600 Active TSS HUES6 Cell Line embryonic stem cell
38 chr19:53236800-53237400 Weak transcription Fetal Lung lung
39 chr19:53236800-53237600 Active TSS HepG2 liver
40 chr19:53236800-53238400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr19:53236800-53238600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr19:53236800-53238600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr19:53236800-53238600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr19:53236800-53238600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr19:53236800-53238600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
46 chr19:53236800-53238600 Active TSS GM12878-XiMat blood
47 chr19:53237000-53237600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
48 chr19:53237000-53237600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr19:53237000-53237800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr19:53237000-53237800 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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