Variant report

Variant	rs707303
Chromosome Location	chr19:53237670-53237671
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:32)
CpG islands
(count:61)
Chromatin interactive
region (count:6)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:32 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	UBTF	chr19:53237505-53237761	K562	blood:	n/a	n/a
2	CTCF	chr19:53237592-53238778	SK-N-SH	brain:	n/a	chr19:53238412-53238425 chr19:53238409-53238427
3	ZBTB7A	chr19:53237636-53237928	ECC-1	luminal epithelium:	n/a	n/a
4	CHD1	chr19:53237579-53237770	GM12878	blood:	n/a	n/a
5	TAF1	chr19:53237489-53238567	H1-hESC	embryonic stem cell:	n/a	n/a
6	RCOR1	chr19:53237546-53238856	IMR90	lung:	n/a	n/a
7	POLR2A	chr19:53237462-53237837	SK-N-MC	brain:	n/a	n/a
8	MAZ	chr19:53237499-53238734	IMR90	lung:	n/a	n/a
9	UBTF	chr19:53237633-53238461	K562	blood:	n/a	n/a
10	EBF1	chr19:53237669-53237866	GM12878	blood:	n/a	n/a
11	POLR2A	chr19:53237458-53238657	H1-hESC	embryonic stem cell:	n/a	n/a
12	RAD21	chr19:53237232-53238801	SK-N-SH	brain:	n/a	chr19:53238415-53238425 chr19:53238415-53238427 chr19:53238413-53238426
13	MXI1	chr19:53237145-53238834	SK-N-SH	brain:	n/a	n/a
14	MAZ	chr19:53237667-53238642	GM12878	blood:	n/a	n/a
15	POLR2A	chr19:53237486-53238547	K562	blood:	n/a	n/a
16	POLR2A	chr19:53237567-53237961	GM12878	blood:	n/a	n/a
17	MAX	chr19:53237663-53238553	NB4	blood:	n/a	n/a
18	ZBTB7A	chr19:53237575-53237912	K562	blood:	n/a	n/a
19	TBP	chr19:53237582-53238495	H1-hESC	embryonic stem cell:	n/a	n/a
20	POLR2A	chr19:53237585-53238531	Hela-S3	cervix:	n/a	n/a
21	POLR2A	chr19:53237494-53238743	GM12892	blood:	n/a	n/a
22	REST	chr19:53237331-53238785	H1-neurons	neurons:	n/a	chr19:53237754-53237767
23	MXI1	chr19:53237348-53238622	IMR90	lung:	n/a	n/a
24	RAD21	chr19:53237588-53238607	IMR90	lung:	n/a	chr19:53238415-53238425 chr19:53238415-53238427 chr19:53238413-53238426
25	ELF1	chr19:53237519-53238832	GM12878	blood:	n/a	chr19:53238285-53238294 chr19:53238285-53238296 chr19:53238285-53238296 chr19:53238286-53238295
26	POLR2A	chr19:53237523-53237800	H1-neurons	neurons:	n/a	n/a
27	POLR2A	chr19:53237574-53237971	GM12878	blood:	n/a	n/a
28	SIN3A	chr19:53237599-53238498	H1-hESC	embryonic stem cell:	n/a	chr19:53238412-53238423
29	SMC3	chr19:53237434-53238864	SK-N-SH	brain:	n/a	chr19:53238411-53238425
30	MAX	chr19:53237555-53238585	K562	blood:	n/a	n/a
31	POLR2A	chr19:53237551-53238737	GM12878	blood:	n/a	n/a
32	POLR2A	chr19:53237500-53237736	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53237645-53237695	MCF10A-Er-Src	breast:	n/a
2	chr19:53237645-53237695	T-47D	breast:	n/a
3	chr19:53237645-53237695	NH-A	brain:	n/a
4	chr19:53237645-53237695	AG09309	skin:	n/a
5	chr19:53237645-53237695	LNCaP	prostate:	n/a
6	chr19:53237645-53237695	MCF-7	breast:	n/a
7	chr19:53237645-53237695	NHBE	bronchial:	n/a
8	chr19:53237645-53237695	PrEC	prostate:	n/a
9	chr19:53237645-53237695	Jurkat	blood:	n/a
10	chr19:53237645-53237695	PFSK-1	brain:	n/a
11	chr19:53237645-53237695	CMK	blood:	n/a
12	chr19:53237645-53237695	Caco-2	colon:	n/a
13	chr19:53237645-53237695	ovcar-3	ovarian:	n/a
14	chr19:53237645-53237695	HRPEpiC	eye:	n/a
15	chr19:53237645-53237695	ProgFib	skin:	n/a
16	chr19:53237645-53237695	NT2-D1	testis:	n/a
17	chr19:53237645-53237695	SK-N-SH_RA	brain:	n/a
18	chr19:53237645-53237695	GM12892	blood:	n/a
19	chr19:53237645-53237695	GM06990	blood:	n/a
20	chr19:53237645-53237695	HRCEpiC	kidney:	n/a
21	chr19:53237645-53237695	HEK293	kidney:	embryo
22	chr19:53237645-53237695	SK-N-MC	brain:	n/a
23	chr19:53237645-53237695	HAEpiC	amniotic membrane:	n/a
24	chr19:53237645-53237695	HRE	kidney:	n/a
25	chr19:53237645-53237695	HPAEpiC	pulmonary alveolar:	n/a
26	chr19:53237645-53237695	ECC-1	luminal epithelium:	n/a
27	chr19:53237645-53237695	H1-hESC	embryonic stem cell:	embryo
28	chr19:53237645-53237695	AG04449	skin:	fetal
29	chr19:53237645-53237695	HUVEC	blood vessel:	n/a
30	chr19:53237645-53237695	K562	blood:	n/a
31	chr19:53237645-53237695	IMR90	lung:	fetal
32	chr19:53237645-53237695	BE2_C	brain:	n/a
33	chr19:53237645-53237695	AG04450	lung:	fetal
34	chr19:53237645-53237695	GM12878	blood:	n/a
35	chr19:53237645-53237695	HIPEpiC	eye:	n/a
36	chr19:53237645-53237695	AoSMC	blood vessel:	n/a
37	chr19:53237645-53237695	HL-60	blood:	n/a
38	chr19:53237645-53237695	HNPCEpiC	eye:	n/a
39	chr19:53237645-53237695	NHDF-neo	bronchial:	n/a
40	chr19:53237645-53237695	RPTEC	kidney:	n/a
41	chr19:53237645-53237695	SKMC	muscle:	n/a
42	chr19:53237645-53237695	HCM	heart:	n/a
43	chr19:53237645-53237695	AG10803	skin:	n/a
44	chr19:53237645-53237695	NB4	blood:	n/a
45	chr19:53237645-53237695	HCF	heart:	n/a
46	chr19:53237645-53237695	GM19239	blood:	n/a
47	chr19:53237645-53237695	Hepatocyte	liver:	n/a
48	chr19:53237645-53237695	HepG2	liver:	n/a
49	chr19:53237645-53237695	A549	lung:	n/a
50	chr19:53237645-53237695	BJ	skin:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53227707..53230460-chr19:53236213..53239636,6	K562	blood:
2	chr19:53227642..53230112-chr19:53236849..53239461,2	K562	blood:
3	chr19:53233250..53234773-chr19:53236233..53238057,2	K562	blood:
4	chr19:53237008..53239147-chr19:53540786..53542527,2	MCF-7	breast:
5	chr19:53236244..53237950-chr19:53242142..53244901,2	K562	blood:
6	chr19:53115970..53118193-chr19:53236786..53238588,2	K562	blood:

No data

Variant related genes	Relation type
ZNF611	TF binding region
ZNF611	CpG island
ENSG00000167766	Chromatin interaction
ENSG00000242779	Chromatin interaction
ENSG00000213020	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10408423	0.82[JPT][hapmap]
rs10419223	0.96[CEU][hapmap];0.91[CHB][hapmap];0.83[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11084188	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11084189	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11084190	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11671744	0.81[JPT][hapmap]
rs1971064	0.95[CHB][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs4801931	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7250045	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:43 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057296	chr19:52950339-53396986	Weak transcription Active TSS ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv833874	chr19:53058014-53257875	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv912305	chr19:53092465-53349850	Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	nsv912306	chr19:53092465-53400760	Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	nsv912307	chr19:53092465-53433054	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv912308	chr19:53092465-53436337	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
7	nsv912309	chr19:53092465-53440653	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
8	nsv912310	chr19:53092465-53451291	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
9	nsv912312	chr19:53103875-53296371	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
10	nsv912313	chr19:53103875-53436337	ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
11	nsv912317	chr19:53105547-53440653	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
12	nsv1066762	chr19:53112568-53552217	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
13	nsv912318	chr19:53118278-53451291	Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
14	esv3489404	chr19:53121944-53391394	ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
15	esv3489405	chr19:53121944-53391394	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
16	nsv432072	chr19:53144788-53554388	Strong transcription ZNF genes & repeats Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
17	esv3401212	chr19:53151131-53482063	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
18	nsv912319	chr19:53152923-53241107	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
19	nsv912320	chr19:53164172-53243026	Enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
20	nsv912321	chr19:53186836-53451291	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
21	nsv1058903	chr19:53193570-53489633	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
22	nsv1067280	chr19:53193570-53567287	Active TSS Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
23	nsv544062	chr19:53193570-53567287	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
24	nsv580030	chr19:53194344-53547394	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
25	nsv1067557	chr19:53195426-53319092	Enhancers Active TSS ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
26	nsv1057118	chr19:53195426-53480449	Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
27	esv2599883	chr19:53199036-53262483	ZNF genes & repeats Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
28	nsv1065345	chr19:53199614-53254617	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
29	esv3331661	chr19:53200023-53262312	Active TSS Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
30	esv7362	chr19:53204293-53265963	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
31	nsv1062976	chr19:53205373-53274297	Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
32	esv3388532	chr19:53206027-53266994	Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
33	nsv470152	chr19:53207182-53249348	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
34	nsv458745	chr19:53207182-53274396	ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
35	nsv580031	chr19:53207182-53274396	Genic enhancers Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
36	nsv530807	chr19:53210488-53695881	Strong transcription Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
37	nsv833875	chr19:53211335-53391459	Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
38	esv3363127	chr19:53212333-53273987	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
39	nsv1061338	chr19:53212361-53253763	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
40	nsv912322	chr19:53212361-53267506	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
41	nsv1063862	chr19:53213111-53254617	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
42	esv3350085	chr19:53213910-53275524	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
43	nsv1055617	chr19:53223123-53274297	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53236600-53238600	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr19:53236800-53238400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr19:53236800-53238600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr19:53236800-53238600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr19:53236800-53238600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr19:53236800-53238600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr19:53236800-53238600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr19:53236800-53238600	Active TSS	GM12878-XiMat	blood
9	chr19:53237000-53237800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr19:53237000-53237800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
11	chr19:53237000-53238400	Active TSS	HUES64 Cell Line	embryonic stem cell
12	chr19:53237000-53238600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr19:53237000-53238600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
14	chr19:53237000-53238800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr19:53237000-53238800	Active TSS	Brain Angular Gyrus	brain
16	chr19:53237000-53238800	Active TSS	Hela-S3	cervix
17	chr19:53237200-53237800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
18	chr19:53237200-53237800	Flanking Active TSS	Primary B cells from cord blood	blood
19	chr19:53237200-53237800	Flanking Active TSS	Primary T cells from cord blood	blood
20	chr19:53237200-53237800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
21	chr19:53237200-53237800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
22	chr19:53237200-53237800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
23	chr19:53237200-53237800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr19:53237200-53237800	Flanking Active TSS	Adipose Nuclei	Adipose
25	chr19:53237200-53237800	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
26	chr19:53237200-53237800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
27	chr19:53237200-53238000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
28	chr19:53237200-53238000	Flanking Active TSS	Primary hematopoietic stem cells	blood
29	chr19:53237200-53238000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
30	chr19:53237200-53238400	Active TSS	Fetal Stomach	stomach
31	chr19:53237200-53238400	Active TSS	HMEC	breast
32	chr19:53237200-53238600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr19:53237200-53238600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr19:53237200-53238600	Active TSS	Fetal Intestine Small	intestine
35	chr19:53237200-53238600	Active TSS	Rectal Smooth Muscle	rectum
36	chr19:53237200-53238600	Active TSS	NHDF-Ad	bronchial
37	chr19:53237200-53238800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr19:53237200-53238800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr19:53237200-53238800	Active TSS	Brain Anterior Caudate	brain
40	chr19:53237200-53238800	Active TSS	Fetal Intestine Large	intestine
41	chr19:53237200-53238800	Active TSS	A549	lung
42	chr19:53237200-53238800	Active TSS	NHLF	lung
43	chr19:53237200-53239000	Active TSS	Pancreatic Islets	Pancreatic Islet
44	chr19:53237200-53239200	Active TSS	H9 Cell Line	embryonic stem cell
45	chr19:53237200-53239200	Active TSS	Fetal Kidney	kidney
46	chr19:53237200-53239400	Active TSS	HSMM	muscle
47	chr19:53237200-53239400	Active TSS	HSMMtube	muscle
48	chr19:53237400-53237800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
49	chr19:53237400-53237800	Flanking Active TSS	Primary B cells from peripheral blood	blood
50	chr19:53237400-53237800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood

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