Variant report

Variant	rs11187760
Chromosome Location	chr10:95749315-95749316
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10882378	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10882379	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10882380	0.82[ASN][1000 genomes]
rs11187741	0.84[ASN][1000 genomes]
rs11187765	0.81[ASN][1000 genomes]
rs11187767	0.81[ASN][1000 genomes]
rs11594479	0.82[ASN][1000 genomes]
rs11599672	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12573786	0.84[ASN][1000 genomes]
rs35038192	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3814689	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61866000	0.84[ASN][1000 genomes]
rs61866026	0.81[ASN][1000 genomes]
rs61886277	0.82[ASN][1000 genomes]
rs6583922	0.82[ASN][1000 genomes]
rs7071652	0.82[ASN][1000 genomes]
rs7073291	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7094594	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038218	chr10:95728508-95751499	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95748000-95750600	Weak transcription	A549	lung
2	chr10:95748400-95750800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr10:95749000-95749400	ZNF genes & repeats	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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