Variant report

Variant	rs11187767
Chromosome Location	chr10:95779300-95779301
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10882378	0.82[CEU][hapmap];0.87[CHB][hapmap];0.94[JPT][hapmap];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10882379	0.82[CEU][hapmap];0.87[CHB][hapmap];0.94[JPT][hapmap];0.92[AFR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10882380	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11187741	0.80[ASN][1000 genomes]
rs11187760	0.81[ASN][1000 genomes]
rs11187765	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11594479	0.90[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11599672	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12573786	0.80[ASN][1000 genomes]
rs35038192	0.85[EUR][1000 genomes]
rs3814689	0.95[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61866000	0.80[ASN][1000 genomes]
rs61866026	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61886277	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6583922	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7071652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7073291	0.82[CEU][hapmap];0.87[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7094594	0.80[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95767800-95789800	Weak transcription	Pancreas	Pancrea
2	chr10:95768400-95783000	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr10:95770000-95800800	Weak transcription	Colonic Mucosa	Colon
4	chr10:95770400-95783800	Weak transcription	Fetal Intestine Small	intestine
5	chr10:95772400-95783800	Weak transcription	Right Atrium	heart
6	chr10:95774800-95782600	Weak transcription	Fetal Muscle Leg	muscle
7	chr10:95775400-95782800	Weak transcription	Stomach Mucosa	stomach
8	chr10:95777000-95784400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:95778400-95779600	Weak transcription	HSMMtube	muscle
10	chr10:95778400-95782200	Weak transcription	Fetal Intestine Large	intestine
11	chr10:95778400-95784800	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr10:95778600-95783600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr10:95779200-95779800	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr10:95779200-95779800	Enhancers	Fetal Brain Female	brain
15	chr10:95779200-95783000	Weak transcription	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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