Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11188367	0.90[EUR][1000 genomes]
rs11188382	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11188383	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11188388	0.80[EUR][1000 genomes]
rs11188405	0.80[EUR][1000 genomes]
rs11188410	0.80[EUR][1000 genomes]
rs11188412	0.83[EUR][1000 genomes]
rs11188413	0.83[EUR][1000 genomes]
rs11188415	0.83[EUR][1000 genomes]
rs11188461	0.80[EUR][1000 genomes]
rs11188466	0.80[EUR][1000 genomes]
rs11188467	0.80[EUR][1000 genomes]
rs11188469	0.80[EUR][1000 genomes]
rs11188475	0.80[EUR][1000 genomes]
rs12354465	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12357513	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs41291576	0.80[EUR][1000 genomes]
rs56747025	0.80[EUR][1000 genomes]
rs58059905	0.83[EUR][1000 genomes]
rs61587319	0.80[EUR][1000 genomes]
rs61736814	0.90[EUR][1000 genomes]
rs7090630	0.80[EUR][1000 genomes]
rs73331134	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526180	chr10:97332195-97511037	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97335200-97373400	Weak transcription	Psoas Muscle	Psoas
2	chr10:97339600-97351400	Weak transcription	Placenta	Placenta
3	chr10:97342600-97343800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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