Variant report

Variant	rs11188367
Chromosome Location	chr10:97329911-97329912
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97319586..97322599-chr10:97327205..97330905,3	K562	blood:

Variant related genes	Relation type
ENSG00000095637	Chromatin interaction

Extended variants
information (count: 89 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:89)

rs_ID	r²[population]
rs10882622	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap]
rs10882623	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882624	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882625	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10882626	1.00[CHB][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882627	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882628	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882629	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882630	0.94[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882631	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882632	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882633	0.97[ASN][1000 genomes]
rs10882634	0.91[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882635	0.97[ASN][1000 genomes]
rs10882636	1.00[ASN][1000 genomes]
rs11188366	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188368	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188369	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188370	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188371	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188376	0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188378	0.90[EUR][1000 genomes]
rs11188382	0.95[EUR][1000 genomes]
rs11188383	0.95[EUR][1000 genomes]
rs11188388	0.85[EUR][1000 genomes]
rs11188389	1.00[ASN][1000 genomes]
rs11188391	0.80[EUR][1000 genomes]
rs11188405	0.85[EUR][1000 genomes]
rs11188410	0.82[CEU][hapmap];0.85[EUR][1000 genomes]
rs11188412	0.82[CEU][hapmap];0.87[EUR][1000 genomes]
rs11188413	0.87[EUR][1000 genomes]
rs11188415	0.87[CEU][hapmap];0.87[EUR][1000 genomes]
rs11188419	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs11188424	0.83[EUR][1000 genomes]
rs11188431	0.87[CEU][hapmap];0.83[EUR][1000 genomes]
rs11188448	0.80[EUR][1000 genomes]
rs11188450	0.80[EUR][1000 genomes]
rs11188451	0.80[EUR][1000 genomes]
rs11188461	0.85[EUR][1000 genomes]
rs11188466	0.87[CEU][hapmap];0.80[EUR][1000 genomes]
rs11188467	0.80[EUR][1000 genomes]
rs11188469	0.82[CEU][hapmap];0.80[EUR][1000 genomes]
rs11188471	1.00[JPT][hapmap]
rs11188475	0.87[CEU][hapmap];0.80[EUR][1000 genomes]
rs11553577	0.82[CEU][hapmap];0.80[EUR][1000 genomes]
rs12218873	0.93[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12242866	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12242918	1.00[JPT][hapmap];0.90[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12242923	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12248661	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12250514	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12255572	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12257523	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12259971	0.83[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs12263982	1.00[ASN][1000 genomes]
rs12264173	0.97[ASN][1000 genomes]
rs12267675	0.89[ASN][1000 genomes]
rs12269408	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];1.00[ASN][1000 genomes]
rs12354465	1.00[EUR][1000 genomes]
rs12357211	0.85[EUR][1000 genomes]
rs12357513	0.82[CEU][hapmap];1.00[EUR][1000 genomes]
rs12358517	0.87[CEU][hapmap];0.83[EUR][1000 genomes]
rs12416103	1.00[JPT][hapmap]
rs3818833	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs41291576	0.80[EUR][1000 genomes]
rs56747025	0.80[EUR][1000 genomes]
rs58059905	0.87[EUR][1000 genomes]
rs61587319	0.85[EUR][1000 genomes]
rs61736814	1.00[EUR][1000 genomes]
rs6584010	0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7081293	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7085365	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7086374	0.94[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7090630	0.82[CEU][hapmap];0.80[EUR][1000 genomes]
rs7099430	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7099515	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73325155	1.00[ASN][1000 genomes]
rs73325195	0.91[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs73329287	0.80[EUR][1000 genomes]
rs73331134	0.80[EUR][1000 genomes]
rs74150947	0.85[ASN][1000 genomes]
rs7896068	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7900149	1.00[ASN][1000 genomes]
rs7903143	0.91[ASN][1000 genomes]
rs7912555	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7914594	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7914886	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7915910	0.97[ASN][1000 genomes]
rs7915912	0.92[AFR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97321600-97332200	Weak transcription	Right Ventricle	heart
2	chr10:97321800-97331800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr10:97321800-97332200	Weak transcription	Brain Anterior Caudate	brain
4	chr10:97326200-97332000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr10:97328400-97332000	Weak transcription	Fetal Lung	lung
6	chr10:97328400-97332000	Weak transcription	Fetal Stomach	stomach
7	chr10:97328400-97332000	Weak transcription	Right Atrium	heart
8	chr10:97328600-97332000	Weak transcription	Colon Smooth Muscle	Colon
9	chr10:97328800-97332200	Weak transcription	Stomach Smooth Muscle	stomach
10	chr10:97329000-97332000	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr10:97329200-97330800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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