Variant report

Variant	rs7915912
Chromosome Location	chr10:97349766-97349767
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10882623	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882624	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882625	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10882626	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882627	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882628	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882629	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882630	0.87[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs10882631	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882632	0.85[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10882633	1.00[ASN][1000 genomes]
rs10882634	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10882635	1.00[ASN][1000 genomes]
rs10882636	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11188366	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188367	0.92[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188368	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188369	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188370	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188371	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188376	0.85[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11188389	0.85[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12218873	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12242866	0.83[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12242918	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12242923	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12248661	0.97[ASN][1000 genomes]
rs12250514	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12255572	0.97[ASN][1000 genomes]
rs12257523	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12259971	0.90[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs12263982	0.82[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12264173	1.00[ASN][1000 genomes]
rs12267675	0.86[ASN][1000 genomes]
rs12269408	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6584010	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7081293	0.97[ASN][1000 genomes]
rs7085365	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7086374	0.87[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7099430	0.91[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7099515	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs73325155	0.97[ASN][1000 genomes]
rs73325195	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs74150947	0.81[ASN][1000 genomes]
rs7896068	0.85[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7896181	1.00[AMR][1000 genomes]
rs7900029	1.00[AMR][1000 genomes]
rs7900149	0.97[ASN][1000 genomes]
rs7903143	0.94[ASN][1000 genomes]
rs7912555	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7914594	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7914886	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7915910	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526180	chr10:97332195-97511037	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97335200-97373400	Weak transcription	Psoas Muscle	Psoas
2	chr10:97339600-97351400	Weak transcription	Placenta	Placenta

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