Variant report

Variant	rs11230248
Chromosome Location	chr11:60085893-60085894
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs1020288	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10431136	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10750932	0.86[EUR][1000 genomes]
rs10750933	0.86[EUR][1000 genomes]
rs10750934	0.85[EUR][1000 genomes]
rs10750935	0.86[EUR][1000 genomes]
rs10792264	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10792265	0.86[EUR][1000 genomes]
rs10792267	0.86[EUR][1000 genomes]
rs10792268	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10897027	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10897028	0.85[EUR][1000 genomes]
rs10897030	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10897031	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10897032	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10897033	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10897047	0.86[EUR][1000 genomes]
rs10897048	0.86[EUR][1000 genomes]
rs10897049	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11230239	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11230240	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11230243	0.84[EUR][1000 genomes]
rs11230280	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11605188	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11605235	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12225299	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12792791	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12798157	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12802385	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1443250	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1899571	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1899572	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2289614	0.86[EUR][1000 genomes]
rs2304933	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2304934	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2304935	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2304936	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2868118	0.84[EUR][1000 genomes]
rs2868119	0.84[EUR][1000 genomes]
rs2868120	0.84[EUR][1000 genomes]
rs2868121	0.85[EUR][1000 genomes]
rs35905922	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4477457	0.86[EUR][1000 genomes]
rs4506675	0.86[EUR][1000 genomes]
rs61900468	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7103808	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7108879	0.85[EUR][1000 genomes]
rs7116069	0.85[EUR][1000 genomes]
rs7924433	0.85[EUR][1000 genomes]
rs7931525	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:60083800-60086200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:60084400-60086400	Weak transcription	Placenta	Placenta
3	chr11:60085800-60087200	ZNF genes & repeats	GM12878-XiMat	blood

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