Variant report

Variant	rs7103808
Chromosome Location	chr11:60078176-60078177
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs1020288	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10431136	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10750932	0.87[CEU][hapmap];0.81[JPT][hapmap];0.84[EUR][1000 genomes]
rs10750933	0.84[EUR][1000 genomes]
rs10750934	0.84[EUR][1000 genomes]
rs10750935	0.83[CEU][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes]
rs10792264	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10792265	0.83[CEU][hapmap];0.85[JPT][hapmap];0.84[EUR][1000 genomes]
rs10792267	0.84[EUR][1000 genomes]
rs10792268	1.00[CEU][hapmap];0.89[CHB][hapmap];0.90[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10897024	0.88[YRI][hapmap];0.81[AFR][1000 genomes]
rs10897027	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10897028	0.85[EUR][1000 genomes]
rs10897030	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10897031	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10897032	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10897033	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10897044	0.83[CEU][hapmap];0.81[JPT][hapmap]
rs10897045	0.83[CEU][hapmap];0.81[JPT][hapmap]
rs10897046	0.83[CEU][hapmap];0.81[JPT][hapmap]
rs10897047	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs10897048	0.83[CEU][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes]
rs10897049	1.00[CEU][hapmap];0.89[CHB][hapmap];0.90[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11230235	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs11230239	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11230240	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11230243	0.85[EUR][1000 genomes]
rs11230248	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11230275	0.80[JPT][hapmap]
rs11230276	0.83[CEU][hapmap];0.81[JPT][hapmap]
rs11230280	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11605188	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11605235	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12225299	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12792791	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12798157	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12802385	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1443250	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1899571	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1899572	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2044981	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs2289614	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs2304933	1.00[CEU][hapmap];0.89[CHB][hapmap];0.90[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2304934	1.00[CEU][hapmap];0.85[CHB][hapmap];0.90[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2304935	1.00[CEU][hapmap];0.89[CHB][hapmap];0.86[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2304936	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2868118	0.82[EUR][1000 genomes]
rs2868119	0.82[EUR][1000 genomes]
rs2868120	0.82[EUR][1000 genomes]
rs2868121	0.83[CEU][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes]
rs35905922	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4477457	0.84[EUR][1000 genomes]
rs4506675	0.83[CEU][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes]
rs61900468	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7108879	0.85[EUR][1000 genomes]
rs7116069	0.84[EUR][1000 genomes]
rs7924433	0.84[CEU][hapmap];0.81[JPT][hapmap];0.84[EUR][1000 genomes]
rs7931525	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7950431	0.84[CEU][hapmap];0.81[JPT][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:60059200-60078400	Weak transcription	Primary B cells from cord blood	blood
2	chr11:60074600-60078400	Weak transcription	Adipose Nuclei	Adipose
3	chr11:60075400-60078600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr11:60075800-60081000	Weak transcription	Placenta	Placenta
5	chr11:60077000-60078600	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr11:60077200-60078600	Enhancers	Primary B cells from peripheral blood	blood
7	chr11:60077800-60078200	Flanking Active TSS	GM12878-XiMat	blood
8	chr11:60077800-60078800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr11:60077800-60078800	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr11:60078000-60078200	Enhancers	HUVEC	blood vessel
11	chr11:60078000-60078600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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