Variant report

Variant	rs1126014
Chromosome Location	chr5:146914079-146914080
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10463277	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10463278	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11949718	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11951211	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11953038	0.99[EUR][1000 genomes]
rs12055156	0.99[EUR][1000 genomes]
rs12108716	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12109947	0.96[EUR][1000 genomes]
rs1432846	0.99[EUR][1000 genomes]
rs1432847	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17106850	0.99[EUR][1000 genomes]
rs17650890	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1897561	0.99[EUR][1000 genomes]
rs41410444	0.99[EUR][1000 genomes]
rs41506250	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6580470	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66795022	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs67406727	0.99[EUR][1000 genomes]
rs67599220	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs68165938	0.99[EUR][1000 genomes]
rs6871170	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6876990	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6877330	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72833384	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72833394	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72833397	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72833398	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72833399	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72833401	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7713359	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7715946	0.97[EUR][1000 genomes]
rs7716144	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146910800-146914200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr5:146911400-146914400	Weak transcription	HSMM	muscle
3	chr5:146911600-146917800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr5:146912000-146915200	Weak transcription	Colon Smooth Muscle	Colon
5	chr5:146912200-146914200	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr5:146912200-146914200	Weak transcription	HUVEC	blood vessel
7	chr5:146912200-146915400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr5:146912400-146914200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr5:146912400-146915600	Weak transcription	Rectal Smooth Muscle	rectum
10	chr5:146912400-146917600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr5:146912800-146914400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr5:146913200-146916400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr5:146913200-146916800	Enhancers	NHLF	lung
14	chr5:146913200-146917000	Enhancers	NH-A	brain
15	chr5:146913600-146916800	Enhancers	Osteobl	bone
16	chr5:146913800-146914600	Enhancers	Adipose Nuclei	Adipose
17	chr5:146913800-146915000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr5:146913800-146915000	Enhancers	Ovary	ovary
19	chr5:146913800-146915000	Enhancers	NHDF-Ad	bronchial
20	chr5:146913800-146915800	Enhancers	HMEC	breast
21	chr5:146913800-146915800	Enhancers	NHEK	skin
22	chr5:146913800-146916000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr5:146914000-146915800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr5:146914000-146917000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr5:146914000-146918600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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