Variant report

Variant	rs68165938
Chromosome Location	chr5:146919539-146919540
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10463277	0.97[EUR][1000 genomes]
rs10463278	0.94[AFR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1126014	0.99[EUR][1000 genomes]
rs11949718	0.99[EUR][1000 genomes]
rs11951211	0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs11953038	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12055156	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12108716	0.99[EUR][1000 genomes]
rs12109947	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1432846	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1432847	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs1594660	0.83[ASN][1000 genomes]
rs17106850	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17650890	0.99[EUR][1000 genomes]
rs1897560	0.83[ASN][1000 genomes]
rs1897561	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34055697	0.83[ASN][1000 genomes]
rs34506199	0.83[ASN][1000 genomes]
rs35983616	0.83[ASN][1000 genomes]
rs41410444	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41506250	0.94[AFR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6580470	0.96[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs66795022	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67406727	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67599220	0.97[EUR][1000 genomes]
rs6871170	0.97[EUR][1000 genomes]
rs6876990	0.93[AFR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6877330	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72833384	0.99[EUR][1000 genomes]
rs72833394	0.97[EUR][1000 genomes]
rs72833397	0.97[EUR][1000 genomes]
rs72833398	0.97[EUR][1000 genomes]
rs72833399	0.97[EUR][1000 genomes]
rs72833401	0.97[EUR][1000 genomes]
rs7713359	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7715946	0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7716144	0.99[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146915600-146933400	Weak transcription	Ovary	ovary
2	chr5:146917400-146920200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr5:146917800-146919600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr5:146917800-146919800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr5:146917800-146919800	Enhancers	NHDF-Ad	bronchial
6	chr5:146917800-146920000	Enhancers	Osteobl	bone
7	chr5:146918000-146919800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr5:146919000-146919800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr5:146919000-146923800	Weak transcription	HUVEC	blood vessel
10	chr5:146919200-146919800	Weak transcription	Muscle Satellite Cultured Cells	--

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