Variant report

Variant	rs11265145
Chromosome Location	chr1:159187435-159187436
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 105 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:105)

rs_ID	r²[population]
rs10047107	1.00[EUR][1000 genomes]
rs10437336	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10437337	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10489847	1.00[EUR][1000 genomes]
rs10489850	1.00[EUR][1000 genomes]
rs10489851	1.00[EUR][1000 genomes]
rs10489852	1.00[EUR][1000 genomes]
rs10489853	1.00[EUR][1000 genomes]
rs11265143	0.87[AFR][1000 genomes]
rs11265146	0.81[AFR][1000 genomes]
rs11265147	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11265148	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11265151	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11265153	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11265167	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12057331	1.00[EUR][1000 genomes]
rs12060241	1.00[EUR][1000 genomes]
rs12062367	1.00[EUR][1000 genomes]
rs12063682	1.00[EUR][1000 genomes]
rs12063973	1.00[EUR][1000 genomes]
rs12064129	1.00[EUR][1000 genomes]
rs12064962	1.00[EUR][1000 genomes]
rs12067678	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12068030	1.00[EUR][1000 genomes]
rs12068651	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12074418	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12074452	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12074934	1.00[EUR][1000 genomes]
rs12078114	1.00[EUR][1000 genomes]
rs12078168	1.00[EUR][1000 genomes]
rs12079229	1.00[EUR][1000 genomes]
rs12079235	1.00[EUR][1000 genomes]
rs12082893	1.00[EUR][1000 genomes]
rs12085001	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12085085	1.00[EUR][1000 genomes]
rs12085686	1.00[EUR][1000 genomes]
rs12086637	1.00[EUR][1000 genomes]
rs12086871	1.00[EUR][1000 genomes]
rs12087219	0.89[YRI][hapmap]
rs12087366	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12095599	1.00[EUR][1000 genomes]
rs12096257	1.00[EUR][1000 genomes]
rs13374880	1.00[EUR][1000 genomes]
rs16841729	1.00[EUR][1000 genomes]
rs16841784	1.00[EUR][1000 genomes]
rs16841789	1.00[EUR][1000 genomes]
rs16841937	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16841970	1.00[EUR][1000 genomes]
rs16842041	1.00[EUR][1000 genomes]
rs2325923	1.00[EUR][1000 genomes]
rs2325925	1.00[EUR][1000 genomes]
rs2325927	1.00[EUR][1000 genomes]
rs2746042	1.00[EUR][1000 genomes]
rs2746043	1.00[TSI][hapmap]
rs2746044	1.00[TSI][hapmap]
rs2814755	1.00[TSI][hapmap]
rs2852717	1.00[TSI][hapmap]
rs2852719	1.00[TSI][hapmap]
rs28537540	1.00[EUR][1000 genomes]
rs3026944	1.00[EUR][1000 genomes]
rs3026947	1.00[EUR][1000 genomes]
rs3026970	1.00[EUR][1000 genomes]
rs3026984	1.00[EUR][1000 genomes]
rs3027031	0.87[AFR][1000 genomes]
rs3027040	0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3027041	0.89[ASW][hapmap];0.82[LWK][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3027046	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs3027047	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3027050	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3027054	0.84[AFR][1000 genomes]
rs3027057	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3027066	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34152791	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34870435	1.00[EUR][1000 genomes]
rs35122728	1.00[EUR][1000 genomes]
rs35507685	0.86[AFR][1000 genomes]
rs36103299	1.00[EUR][1000 genomes]
rs36160848	1.00[EUR][1000 genomes]
rs3893415	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4255380	1.00[EUR][1000 genomes]
rs4534374	1.00[EUR][1000 genomes]
rs4568831	1.00[EUR][1000 genomes]
rs56113018	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59437380	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6656586	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs6670082	1.00[EUR][1000 genomes]
rs6670592	1.00[EUR][1000 genomes]
rs6670703	1.00[EUR][1000 genomes]
rs6673514	1.00[EUR][1000 genomes]
rs6695631	1.00[EUR][1000 genomes]
rs6696230	1.00[EUR][1000 genomes]
rs73023773	1.00[EUR][1000 genomes]
rs73023775	1.00[EUR][1000 genomes]
rs73027932	1.00[EUR][1000 genomes]
rs74122265	1.00[EUR][1000 genomes]
rs7515532	1.00[EUR][1000 genomes]
rs7552141	1.00[EUR][1000 genomes]
rs856059	1.00[EUR][1000 genomes]
rs856060	1.00[EUR][1000 genomes]
rs856061	1.00[EUR][1000 genomes]
rs856062	1.00[EUR][1000 genomes]
rs856063	1.00[EUR][1000 genomes]
rs856065	1.00[EUR][1000 genomes]
rs856069	1.00[EUR][1000 genomes]
rs864439	1.00[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159158800-159188800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:159178200-159188000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr1:159181400-159188400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr1:159185000-159190400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr1:159186400-159188400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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