The 2.0 version of rSNPBase

Variant report

Variant rs856063
Chromosome Location chr1:158981802-158981803
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158976000-158983000 Weak transcription Spleen Spleen
2 chr1:158976000-159000800 Weak transcription Gastric stomach
3 chr1:158977200-158990400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:158977800-158982400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:158978600-158984200 Active TSS Rectal Smooth Muscle rectum
6 chr1:158978800-158983800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:158978800-158985800 Active TSS Rectal Mucosa Donor 29 rectum
8 chr1:158979200-158982600 Active TSS Fetal Stomach stomach
9 chr1:158979200-158982800 Active TSS NHLF lung
10 chr1:158979200-158983200 Active TSS Rectal Mucosa Donor 31 rectum
11 chr1:158979200-158983400 Active TSS Right Atrium heart
12 chr1:158979200-158984000 Active TSS Stomach Smooth Muscle stomach
13 chr1:158979400-158982000 Active TSS Primary T helper naive cells from peripheral blood blood
14 chr1:158979400-158982200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:158979400-158982200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:158979400-158982200 Active TSS NHDF-Ad bronchial
17 chr1:158979400-158982400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:158979400-158982400 Active TSS Fetal Kidney kidney
19 chr1:158979400-158982400 Active TSS Fetal Lung lung
20 chr1:158979400-158982400 Active TSS HSMM muscle
21 chr1:158979400-158982400 Active TSS HSMMtube muscle
22 chr1:158979400-158982800 Active TSS Fetal Intestine Large intestine
23 chr1:158979400-158983000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:158979400-158983000 Active TSS Primary T cells fromperipheralblood blood
25 chr1:158979400-158983000 Active TSS Ovary ovary
26 chr1:158979400-158983000 Active TSS Thymus Thymus
27 chr1:158979400-158983200 Active TSS Breast Myoepithelial Primary Cells Breast
28 chr1:158979400-158983200 Active TSS Skeletal Muscle Male skeletal muscle
29 chr1:158979400-158983400 Active TSS Primary T helper cells PMA-I stimulated --
30 chr1:158979400-158983600 Active TSS Fetal Muscle Leg muscle
31 chr1:158979400-158983600 Active TSS Placenta Placenta
32 chr1:158979400-158983800 Active TSS Liver Liver
33 chr1:158979400-158984000 Active TSS Brain Hippocampus Middle brain
34 chr1:158979400-158984000 Active TSS GM12878-XiMat blood
35 chr1:158979400-158984400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:158979400-158984400 Active TSS Brain Anterior Caudate brain
37 chr1:158979400-158984400 Active TSS Duodenum Smooth Muscle Duodenum
38 chr1:158979600-158982000 Active TSS NHEK skin
39 chr1:158979600-158982200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:158979600-158982200 Active TSS HMEC breast
41 chr1:158979600-158982400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:158979600-158982800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:158979600-158983000 Active TSS Primary monocytes fromperipheralblood blood
44 chr1:158979600-158983000 Active TSS Fetal Thymus thymus
45 chr1:158979600-158983200 Active TSS Primary B cells from peripheral blood blood
46 chr1:158979600-158983400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
47 chr1:158979600-158983400 Active TSS Primary T regulatory cells fromperipheralblood blood
48 chr1:158979600-158983400 Active TSS Skeletal Muscle Female skeletal muscle
49 chr1:158979800-158982400 Active TSS Pancreatic Islets Pancreatic Islet
50 chr1:158979800-158984600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015