The 2.0 version of rSNPBase

Variant report

Variant rs856078
Chromosome Location chr1:158972057-158972058
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158960800-158975400 Weak transcription Spleen Spleen
2 chr1:158968600-158974800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:158968600-158977400 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:158968800-158974800 Weak transcription Primary B cells from cord blood blood
5 chr1:158968800-158975200 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr1:158968800-158977000 Weak transcription Primary T cells from cord blood blood
7 chr1:158969000-158975200 Weak transcription Primary monocytes fromperipheralblood blood
8 chr1:158969000-158975200 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr1:158969000-158977200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:158969000-158977400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:158969000-158978200 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:158969800-158975400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:158970000-158974800 Weak transcription Lung lung
14 chr1:158970000-158978600 Weak transcription Esophagus oesophagus
15 chr1:158970200-158972400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr1:158970200-158974800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:158970200-158974800 Weak transcription Placenta Placenta
18 chr1:158970200-158974800 Weak transcription Left Ventricle heart
19 chr1:158970200-158975400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:158970200-158978600 Weak transcription Psoas Muscle Psoas
21 chr1:158970200-158978800 Weak transcription Duodenum Mucosa Duodenum
22 chr1:158970200-158979200 Weak transcription Aorta Aorta
23 chr1:158970400-158974800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:158970600-158974800 Weak transcription Fetal Intestine Large intestine
25 chr1:158970800-158974800 Weak transcription Fetal Muscle Leg muscle
26 chr1:158970800-158974800 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr1:158970800-158975000 Weak transcription Fetal Stomach stomach
28 chr1:158970800-158975200 Weak transcription Fetal Intestine Small intestine
29 chr1:158970800-158980800 Weak transcription Pancreas Pancrea
30 chr1:158971000-158975400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:158971000-158978400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:158971200-158972200 Enhancers HUES48 Cell Line embryonic stem cell
33 chr1:158971200-158972400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:158971200-158972800 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr1:158971200-158973400 Enhancers HUES64 Cell Line embryonic stem cell
36 chr1:158971200-158974800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:158971200-158974800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:158971200-158974800 Weak transcription Ovary ovary
39 chr1:158971200-158975000 Weak transcription Brain Anterior Caudate brain
40 chr1:158971200-158975000 Weak transcription Right Atrium heart
41 chr1:158971200-158975200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr1:158971200-158975200 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:158971200-158975200 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr1:158971200-158975200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:158971200-158975400 Weak transcription NHEK skin
46 chr1:158971200-158978400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:158971200-158978400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:158971200-158978400 Weak transcription HSMM muscle
49 chr1:158971200-158978600 Weak transcription Brain Angular Gyrus brain
50 chr1:158971200-158978600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015