The 2.0 version of rSNPBase

Variant report

Variant rs864439
Chromosome Location chr1:158980645-158980646
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158970800-158980800 Weak transcription Pancreas Pancrea
2 chr1:158976000-158983000 Weak transcription Spleen Spleen
3 chr1:158976000-159000800 Weak transcription Gastric stomach
4 chr1:158977200-158990400 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:158977800-158982400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:158978200-158981400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
7 chr1:158978600-158984200 Active TSS Rectal Smooth Muscle rectum
8 chr1:158978800-158983800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:158978800-158985800 Active TSS Rectal Mucosa Donor 29 rectum
10 chr1:158979000-158980800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:158979000-158981200 Active TSS Brain Inferior Temporal Lobe brain
12 chr1:158979200-158981000 Active TSS Aorta Aorta
13 chr1:158979200-158981200 Active TSS Colonic Mucosa Colon
14 chr1:158979200-158981200 Active TSS Psoas Muscle Psoas
15 chr1:158979200-158982600 Active TSS Fetal Stomach stomach
16 chr1:158979200-158982800 Active TSS NHLF lung
17 chr1:158979200-158983200 Active TSS Rectal Mucosa Donor 31 rectum
18 chr1:158979200-158983400 Active TSS Right Atrium heart
19 chr1:158979200-158984000 Active TSS Stomach Smooth Muscle stomach
20 chr1:158979400-158980800 Active TSS Primary Natural Killer cells fromperipheralblood blood
21 chr1:158979400-158980800 Active TSS Brain Cingulate Gyrus brain
22 chr1:158979400-158981000 Active TSS Brain Angular Gyrus brain
23 chr1:158979400-158981000 Active TSS Sigmoid Colon Sigmoid Colon
24 chr1:158979400-158981000 Active TSS Dnd41 blood
25 chr1:158979400-158981200 Active TSS Fetal Intestine Small intestine
26 chr1:158979400-158981200 Active TSS Left Ventricle heart
27 chr1:158979400-158981400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:158979400-158981600 Active TSS Primary T helper naive cells fromperipheralblood blood
29 chr1:158979400-158981600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
30 chr1:158979400-158982000 Active TSS Primary T helper naive cells from peripheral blood blood
31 chr1:158979400-158982200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:158979400-158982200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:158979400-158982200 Active TSS NHDF-Ad bronchial
34 chr1:158979400-158982400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:158979400-158982400 Active TSS Fetal Kidney kidney
36 chr1:158979400-158982400 Active TSS Fetal Lung lung
37 chr1:158979400-158982400 Active TSS HSMM muscle
38 chr1:158979400-158982400 Active TSS HSMMtube muscle
39 chr1:158979400-158982800 Active TSS Fetal Intestine Large intestine
40 chr1:158979400-158983000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:158979400-158983000 Active TSS Primary T cells fromperipheralblood blood
42 chr1:158979400-158983000 Active TSS Ovary ovary
43 chr1:158979400-158983000 Active TSS Thymus Thymus
44 chr1:158979400-158983200 Active TSS Breast Myoepithelial Primary Cells Breast
45 chr1:158979400-158983200 Active TSS Skeletal Muscle Male skeletal muscle
46 chr1:158979400-158983400 Active TSS Primary T helper cells PMA-I stimulated --
47 chr1:158979400-158983600 Active TSS Fetal Muscle Leg muscle
48 chr1:158979400-158983600 Active TSS Placenta Placenta
49 chr1:158979400-158983800 Active TSS Liver Liver
50 chr1:158979400-158984000 Active TSS Brain Hippocampus Middle brain

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Last update: Aug 31, 2015