Variant report

Variant	rs1145885
Chromosome Location	chr6:82346333-82346334
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1145876	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1145882	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1145883	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1145886	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1145888	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1276878	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1341224	1.00[ASN][1000 genomes]
rs1361548	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1592044	1.00[ASN][1000 genomes]
rs16893194	1.00[ASN][1000 genomes]
rs16893209	1.00[ASN][1000 genomes]
rs1917064	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1923149	1.00[ASN][1000 genomes]
rs1935003	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2153645	1.00[ASW][hapmap];0.87[GIH][hapmap];1.00[MEX][hapmap];0.84[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2185588	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2211283	1.00[ASN][1000 genomes]
rs2226075	1.00[ASN][1000 genomes]
rs2753426	1.00[ASN][1000 genomes]
rs2759451	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2793331	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2793333	1.00[ASN][1000 genomes]
rs4142950	1.00[ASN][1000 genomes]
rs4623287	1.00[ASN][1000 genomes]
rs4706143	1.00[ASN][1000 genomes]
rs4706899	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4706900	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6454227	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6454228	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6454232	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6899579	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6900544	1.00[ASW][hapmap];0.87[GIH][hapmap];1.00[MEX][hapmap];0.84[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs725762	1.00[ASN][1000 genomes]
rs7739492	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7755160	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9344198	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9344200	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9344206	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9353019	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82318000-82356600	Weak transcription	Aorta	Aorta
2	chr6:82344800-82348600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:82345200-82348400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:82346200-82347200	Enhancers	Hela-S3	cervix

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