The 2.0 version of rSNPBase

Variant report

Variant rs1168110
Chromosome Location chr1:63159055-63159056
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63155800-63165000 Weak transcription Primary T cells from cord blood blood
2 chr1:63156400-63159400 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr1:63156400-63170400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:63156600-63159800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:63156600-63160000 Weak transcription H1 Cell Line embryonic stem cell
6 chr1:63156600-63170400 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr1:63156800-63159800 Weak transcription Fetal Muscle Leg muscle
8 chr1:63156800-63160200 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:63156800-63160400 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:63156800-63160400 Weak transcription Gastric stomach
11 chr1:63156800-63161400 Weak transcription Fetal Brain Female brain
12 chr1:63157000-63159600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:63157000-63160600 Weak transcription Brain Substantia Nigra brain
14 chr1:63157200-63160400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:63157200-63161000 Weak transcription Fetal Lung lung
16 chr1:63157400-63161200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:63157400-63170400 Weak transcription Fetal Stomach stomach
18 chr1:63157600-63160600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:63157600-63173000 Weak transcription Duodenum Mucosa Duodenum
20 chr1:63157600-63180800 Weak transcription Fetal Brain Male brain
21 chr1:63157800-63159400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:63157800-63159600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:63157800-63167200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:63158200-63159600 Weak transcription Fetal Intestine Small intestine
25 chr1:63158200-63164200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:63158400-63160400 Weak transcription Fetal Intestine Large intestine
27 chr1:63158400-63166800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:63158600-63159200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:63158600-63159400 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:63158800-63159400 Enhancers Stomach Mucosa stomach
31 chr1:63158800-63160600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:63158800-63170600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:63159000-63159200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:63159000-63159200 Enhancers Brain Anterior Caudate brain
35 chr1:63159000-63159200 Enhancers HMEC breast
36 chr1:63159000-63159200 Enhancers NHEK skin
37 chr1:63159000-63159600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:63159000-63162200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015