The 2.0 version of rSNPBase

Variant report

Variant rs7514389
Chromosome Location chr1:63188642-63188643
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63178800-63190000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:63186200-63188800 Enhancers Rectal Mucosa Donor 31 rectum
3 chr1:63187000-63189200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:63187000-63189800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:63187000-63189800 Weak transcription Brain Cingulate Gyrus brain
6 chr1:63187000-63190200 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr1:63187000-63191000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr1:63187200-63189800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:63187200-63189800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:63187200-63189800 Weak transcription Brain Anterior Caudate brain
11 chr1:63187200-63189800 Weak transcription NH-A brain
12 chr1:63187200-63189800 Weak transcription Osteobl bone
13 chr1:63187200-63190200 Enhancers Primary monocytes fromperipheralblood blood
14 chr1:63187200-63190800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:63187200-63191000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:63187200-63191800 Weak transcription K562 blood
17 chr1:63187200-63195200 Weak transcription Fetal Stomach stomach
18 chr1:63187400-63188800 Enhancers Rectal Mucosa Donor 29 rectum
19 chr1:63187400-63189800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:63187400-63189800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:63187400-63189800 Weak transcription Adipose Nuclei Adipose
22 chr1:63187400-63190000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:63187400-63190000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:63187400-63190200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:63187400-63190200 Weak transcription Stomach Mucosa stomach
26 chr1:63187400-63190400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr1:63187400-63190600 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:63187400-63190800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:63187400-63191000 Weak transcription Fetal Intestine Small intestine
30 chr1:63187400-63191200 Weak transcription Duodenum Mucosa Duodenum
31 chr1:63187400-63198000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:63187600-63189200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:63187600-63189800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:63187600-63190000 Weak transcription Colonic Mucosa Colon
35 chr1:63188000-63189000 Enhancers HepG2 liver
36 chr1:63188000-63189200 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr1:63188000-63189400 Enhancers Monocytes-CD14+_RO01746 blood
38 chr1:63188000-63190600 Weak transcription Small Intestine intestine
39 chr1:63188200-63190600 Weak transcription Fetal Heart heart
40 chr1:63188200-63191000 Enhancers GM12878-XiMat blood
41 chr1:63188200-63191600 Weak transcription Fetal Intestine Large intestine
42 chr1:63188400-63189800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:63188600-63194200 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015