Variant report
| Variant | rs11742542 |
|---|---|
| Chromosome Location | chr5:75774116-75774117 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:75758200-75775000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 2 | chr5:75768400-75774800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 3 | chr5:75768400-75774800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr5:75768400-75780000 | Weak transcription | Esophagus | oesophagus |
| 5 | chr5:75769600-75775600 | Enhancers | K562 | blood |
| 6 | chr5:75769600-75816600 | Weak transcription | Primary B cells from cord blood | blood |
| 7 | chr5:75770000-75775000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 8 | chr5:75770000-75775200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 9 | chr5:75770000-75777600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 10 | chr5:75770000-75779600 | Weak transcription | GM12878-XiMat | blood |
| 11 | chr5:75770200-75775400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 12 | chr5:75770400-75774800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 13 | chr5:75771000-75774800 | Weak transcription | Colonic Mucosa | Colon |
| 14 | chr5:75771000-75775400 | Weak transcription | Fetal Thymus | thymus |
| 15 | chr5:75771000-75776000 | Weak transcription | Primary T cells from cord blood | blood |
| 16 | chr5:75771200-75774400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 17 | chr5:75771400-75775800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 18 | chr5:75771600-75774200 | Weak transcription | Gastric | stomach |
| 19 | chr5:75771600-75775000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 20 | chr5:75771600-75775200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 21 | chr5:75771600-75778000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 22 | chr5:75771800-75775600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 23 | chr5:75772000-75774200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 24 | chr5:75772000-75774400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 25 | chr5:75772000-75775000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 26 | chr5:75772200-75774200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 27 | chr5:75772200-75774600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 28 | chr5:75772200-75774800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 29 | chr5:75772200-75774800 | Weak transcription | Placenta | Placenta |
| 30 | chr5:75772200-75775200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 31 | chr5:75772200-75775200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 32 | chr5:75772200-75782200 | Enhancers | Stomach Mucosa | stomach |
| 33 | chr5:75772400-75774200 | Weak transcription | HepG2 | liver |
| 34 | chr5:75772400-75774400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 35 | chr5:75772400-75774800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 36 | chr5:75772400-75775000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 37 | chr5:75772400-75777800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 38 | chr5:75772600-75774400 | Weak transcription | Pancreas | Pancrea |
| 39 | chr5:75772600-75774600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 40 | chr5:75772600-75774800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 41 | chr5:75772600-75775000 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 42 | chr5:75772600-75775200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 43 | chr5:75772600-75775600 | Weak transcription | Fetal Kidney | kidney |
| 44 | chr5:75772600-75776600 | Enhancers | Duodenum Mucosa | Duodenum |
| 45 | chr5:75772800-75774800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 46 | chr5:75773200-75774200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 47 | chr5:75773200-75774200 | Weak transcription | Liver | Liver |
| 48 | chr5:75773200-75774200 | Weak transcription | Fetal Intestine Large | intestine |
| 49 | chr5:75773200-75774800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 50 | chr5:75773200-75774800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
