Variant report

Variant	rs11791805
Chromosome Location	chr9:95286204-95286205
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:95281336..95283351-chr9:95285922..95288422,3	K562	blood:

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10114912	0.93[ASN][1000 genomes]
rs10114932	0.93[ASN][1000 genomes]
rs10118939	1.00[ASN][1000 genomes]
rs10761160	0.82[ASN][1000 genomes]
rs10761163	0.93[ASN][1000 genomes]
rs10820980	0.83[ASN][1000 genomes]
rs10992349	0.83[ASN][1000 genomes]
rs10992366	0.93[ASN][1000 genomes]
rs11788511	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11788523	0.85[ASN][1000 genomes]
rs11791001	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11791339	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11792019	0.82[ASN][1000 genomes]
rs11792916	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11793563	0.87[AMR][1000 genomes]
rs11793727	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11794346	0.82[ASN][1000 genomes]
rs12336415	0.82[ASN][1000 genomes]
rs12341817	0.83[ASN][1000 genomes]
rs12342019	0.82[ASN][1000 genomes]
rs13301537	0.82[ASN][1000 genomes]
rs1380	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1535756	0.82[ASN][1000 genomes]
rs1980848	0.83[ASN][1000 genomes]
rs2094281	1.00[ASN][1000 genomes]
rs2761678	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3824424	0.89[ASN][1000 genomes]
rs4743873	0.85[ASN][1000 genomes]
rs4744137	1.00[ASN][1000 genomes]
rs4744138	1.00[ASN][1000 genomes]
rs62572543	0.91[ASN][1000 genomes]
rs6479422	0.82[ASN][1000 genomes]
rs7029879	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7029939	0.89[ASN][1000 genomes]
rs7033333	0.87[AMR][1000 genomes]
rs7033979	0.82[ASN][1000 genomes]
rs747628	1.00[ASN][1000 genomes]
rs7847534	1.00[ASN][1000 genomes]
rs7848472	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7850528	0.82[ASN][1000 genomes]
rs7864575	0.93[ASN][1000 genomes]
rs7865019	0.85[ASN][1000 genomes]
rs7868013	0.83[ASN][1000 genomes]
rs7872610	0.96[ASN][1000 genomes]
rs7873397	0.82[ASN][1000 genomes]
rs7874151	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9299405	1.00[ASN][1000 genomes]
rs968040	1.00[ASN][1000 genomes]
rs987553	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050845	chr9:94687959-95312406	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
2	nsv893573	chr9:94974188-95355719	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
3	nsv1047337	chr9:95105638-95347484	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	esv1822933	chr9:95255176-95293308	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95269800-95298800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr9:95276000-95296600	Weak transcription	Colon Smooth Muscle	Colon
3	chr9:95279600-95290400	Weak transcription	Fetal Muscle Leg	muscle
4	chr9:95280800-95290400	Weak transcription	Aorta	Aorta
5	chr9:95280800-95296400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr9:95281400-95295800	Weak transcription	Liver	Liver
7	chr9:95281800-95290400	Weak transcription	Adipose Nuclei	Adipose
8	chr9:95283400-95286400	Weak transcription	Fetal Lung	lung
9	chr9:95283600-95286600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr9:95284000-95296400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr9:95284800-95286800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr9:95285400-95287000	Enhancers	Fetal Intestine Large	intestine
13	chr9:95285400-95287000	Enhancers	Ovary	ovary
14	chr9:95285600-95286400	Flanking Active TSS	K562	blood
15	chr9:95285600-95286600	Enhancers	Fetal Heart	heart
16	chr9:95285800-95286600	Enhancers	Fetal Intestine Small	intestine
17	chr9:95286000-95290400	Weak transcription	Left Ventricle	heart

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