Variant report

Variant	rs11809475
Chromosome Location	chr1:179629152-179629153
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10913824	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10913825	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10913830	0.89[EUR][1000 genomes]
rs11799973	0.86[EUR][1000 genomes]
rs11801024	0.86[EUR][1000 genomes]
rs11805051	0.89[EUR][1000 genomes]
rs11807084	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11808359	0.86[EUR][1000 genomes]
rs11811313	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11811588	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12070589	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12072884	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12085410	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12086806	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12086891	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17278862	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1854336	0.84[EUR][1000 genomes]
rs66623346	0.93[EUR][1000 genomes]
rs6698734	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6698746	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6701343	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs67908894	0.84[EUR][1000 genomes]
rs68054120	0.82[EUR][1000 genomes]
rs72706703	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72706705	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72706706	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72706707	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72706708	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72706709	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72706712	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706713	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706714	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706715	0.89[EUR][1000 genomes]
rs72706716	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706717	0.89[EUR][1000 genomes]
rs72706730	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706745	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706782	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72706784	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179628000-179632200	Weak transcription	HUVEC	blood vessel

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links