Variant report
| Variant | rs1854336 |
|---|---|
| Chromosome Location | chr1:179540506-179540507 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:52)
| rs_ID | r2[population] |
|---|---|
| rs10494519 | 0.80[EUR][1000 genomes] |
| rs10913824 | 0.88[EUR][1000 genomes] |
| rs10913825 | 0.84[EUR][1000 genomes] |
| rs11799973 | 0.97[EUR][1000 genomes] |
| rs11801024 | 0.97[EUR][1000 genomes] |
| rs11802834 | 0.85[EUR][1000 genomes] |
| rs11805319 | 0.88[EUR][1000 genomes] |
| rs11805875 | 0.88[EUR][1000 genomes] |
| rs11806287 | 0.80[EUR][1000 genomes] |
| rs11807084 | 0.84[EUR][1000 genomes] |
| rs11808359 | 0.97[EUR][1000 genomes] |
| rs11809095 | 0.80[EUR][1000 genomes] |
| rs11809475 | 0.84[EUR][1000 genomes] |
| rs11811313 | 0.84[EUR][1000 genomes] |
| rs12070589 | 0.88[EUR][1000 genomes] |
| rs12072884 | 0.84[EUR][1000 genomes] |
| rs12085410 | 0.84[EUR][1000 genomes] |
| rs12086806 | 0.84[EUR][1000 genomes] |
| rs12086891 | 0.84[EUR][1000 genomes] |
| rs2209923 | 0.88[EUR][1000 genomes] |
| rs2209924 | 0.88[EUR][1000 genomes] |
| rs6682308 | 0.88[EUR][1000 genomes] |
| rs6698734 | 0.88[EUR][1000 genomes] |
| rs6698746 | 0.88[EUR][1000 genomes] |
| rs6701343 | 0.88[EUR][1000 genomes] |
| rs67908894 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs68054120 | 0.82[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs72704407 | 0.80[EUR][1000 genomes] |
| rs72704408 | 0.80[EUR][1000 genomes] |
| rs72704416 | 0.80[EUR][1000 genomes] |
| rs72704426 | 0.80[EUR][1000 genomes] |
| rs72704429 | 0.80[EUR][1000 genomes] |
| rs72704430 | 0.80[EUR][1000 genomes] |
| rs72704431 | 0.80[EUR][1000 genomes] |
| rs72704457 | 0.80[EUR][1000 genomes] |
| rs72704464 | 0.88[EUR][1000 genomes] |
| rs72704465 | 0.88[EUR][1000 genomes] |
| rs72704468 | 0.88[EUR][1000 genomes] |
| rs72706703 | 0.97[EUR][1000 genomes] |
| rs72706705 | 0.97[EUR][1000 genomes] |
| rs72706706 | 0.97[EUR][1000 genomes] |
| rs72706707 | 0.97[EUR][1000 genomes] |
| rs72706708 | 0.97[EUR][1000 genomes] |
| rs72706709 | 0.88[EUR][1000 genomes] |
| rs72706712 | 0.84[EUR][1000 genomes] |
| rs72706713 | 0.84[EUR][1000 genomes] |
| rs72706714 | 0.84[EUR][1000 genomes] |
| rs72706716 | 0.84[EUR][1000 genomes] |
| rs72706730 | 0.84[EUR][1000 genomes] |
| rs72706745 | 0.84[EUR][1000 genomes] |
| rs72721234 | 0.80[EUR][1000 genomes] |
| rs72721237 | 0.80[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:179539600-179541200 | Weak transcription | Fetal Kidney | kidney |
