Variant report

Variant	rs72706714
Chromosome Location	chr1:179569006-179569007
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:179338659..179339560-chr1:179568499..179569458,2	MCF-7	breast:
2	chr1:179559457..179562076-chr1:179568845..179571260,2	MCF-7	breast:
3	chr1:179558595..179562573-chr1:179564810..179570275,6	MCF-7	breast:
4	chr1:179567719..179570600-chr1:179574245..179576167,2	MCF-7	breast:
5	chr1:158090190..158092923-chr1:179567746..179569277,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000162782	Chromatin interaction
ENSG00000261060	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10798697	0.94[AFR][1000 genomes]
rs10913824	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10913825	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10913830	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11799973	0.86[EUR][1000 genomes]
rs11801024	0.86[EUR][1000 genomes]
rs11805051	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11807084	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11808359	0.86[EUR][1000 genomes]
rs11809475	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11811313	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11811588	0.93[EUR][1000 genomes]
rs12070589	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12072884	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12085410	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12086806	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12086891	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17278862	0.93[EUR][1000 genomes]
rs1854336	0.84[EUR][1000 genomes]
rs66623346	0.93[EUR][1000 genomes]
rs6698734	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6698746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6701343	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs67908894	0.84[EUR][1000 genomes]
rs68054120	0.82[EUR][1000 genomes]
rs72706703	0.86[EUR][1000 genomes]
rs72706705	0.86[EUR][1000 genomes]
rs72706706	0.86[EUR][1000 genomes]
rs72706707	0.86[EUR][1000 genomes]
rs72706708	0.86[EUR][1000 genomes]
rs72706709	0.95[EUR][1000 genomes]
rs72706712	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706713	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706715	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72706716	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706717	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72706730	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706745	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706782	0.95[EUR][1000 genomes]
rs72706784	0.95[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179568800-179569200	Bivalent Enhancer	Fetal Kidney	kidney

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