Variant report
| Variant | rs11828579 |
|---|---|
| Chromosome Location | chr11:10063416-10063417 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:10001400-10066200 | Weak transcription | Pancreas | Pancrea |
| 2 | chr11:10030600-10065800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 3 | chr11:10035200-10065800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 4 | chr11:10040400-10065800 | Weak transcription | HSMM | muscle |
| 5 | chr11:10042200-10064400 | Weak transcription | Fetal Intestine Small | intestine |
| 6 | chr11:10042200-10066000 | Weak transcription | Fetal Muscle Leg | muscle |
| 7 | chr11:10042200-10066000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr11:10042200-10066200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr11:10042600-10066000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 10 | chr11:10043400-10065600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 11 | chr11:10043800-10063800 | Weak transcription | Primary T cells from cord blood | blood |
| 12 | chr11:10043800-10065400 | Weak transcription | A549 | lung |
| 13 | chr11:10043800-10065600 | Weak transcription | HepG2 | liver |
| 14 | chr11:10046400-10065800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 15 | chr11:10046400-10065800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 16 | chr11:10048600-10064600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 17 | chr11:10049200-10065000 | Weak transcription | Dnd41 | blood |
| 18 | chr11:10049400-10065600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr11:10049800-10065000 | Weak transcription | Fetal Intestine Large | intestine |
| 20 | chr11:10049800-10065600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 21 | chr11:10049800-10066000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 22 | chr11:10049800-10066000 | Weak transcription | Fetal Kidney | kidney |
| 23 | chr11:10050200-10066000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr11:10050200-10066800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 25 | chr11:10050600-10064200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 26 | chr11:10050600-10065000 | Weak transcription | Placenta | Placenta |
| 27 | chr11:10056200-10063800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 28 | chr11:10056200-10066000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 29 | chr11:10057600-10063800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 30 | chr11:10060600-10063800 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 31 | chr11:10060600-10065400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 32 | chr11:10061000-10063600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 33 | chr11:10061000-10063800 | Enhancers | Primary hematopoietic stem cells | blood |
| 34 | chr11:10061200-10064200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 35 | chr11:10061600-10066200 | Weak transcription | Osteobl | bone |
| 36 | chr11:10061800-10066000 | Weak transcription | Hela-S3 | cervix |
| 37 | chr11:10061800-10066200 | Weak transcription | NHLF | lung |
| 38 | chr11:10062000-10064200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 39 | chr11:10062000-10064800 | Strong transcription | NHDF-Ad | bronchial |
| 40 | chr11:10062200-10065000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 41 | chr11:10062600-10065000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 42 | chr11:10062800-10064000 | Strong transcription | Adipose Nuclei | Adipose |
| 43 | chr11:10063000-10063600 | ZNF genes & repeats | Primary T helper memory cells from peripheral blood 1 | blood |
| 44 | chr11:10063000-10063800 | Genic enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 45 | chr11:10063000-10064600 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 46 | chr11:10063200-10063600 | Weak transcription | Fetal Lung | lung |
| 47 | chr11:10063200-10064200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 48 | chr11:10063200-10064600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 49 | chr11:10063200-10065000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 50 | chr11:10063400-10064800 | Enhancers | Liver | Liver |
