The 2.0 version of rSNPBase

Variant report

Variant rs11888595
Chromosome Location chr2:99084708-99084709
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99072200-99086200 Weak transcription Fetal Intestine Small intestine
2 chr2:99072400-99095000 Weak transcription Fetal Intestine Large intestine
3 chr2:99072600-99119600 Weak transcription Aorta Aorta
4 chr2:99075600-99091800 Enhancers Primary monocytes fromperipheralblood blood
5 chr2:99076400-99095400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr2:99076600-99085000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:99077600-99085200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr2:99078400-99095600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr2:99080200-99094200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:99080400-99091400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:99081400-99095800 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr2:99081800-99091400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr2:99082000-99086800 Weak transcription Liver Liver
14 chr2:99082200-99089800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:99082200-99091400 Weak transcription H9 Cell Line embryonic stem cell
16 chr2:99082400-99085400 Enhancers Rectal Mucosa Donor 29 rectum
17 chr2:99082400-99086400 Enhancers Primary T regulatory cells fromperipheralblood blood
18 chr2:99082400-99088600 Weak transcription Psoas Muscle Psoas
19 chr2:99082400-99090200 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr2:99082600-99085600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr2:99082600-99088200 Weak transcription Brain Substantia Nigra brain
22 chr2:99082600-99088400 Weak transcription Brain Cingulate Gyrus brain
23 chr2:99082600-99088400 Weak transcription Brain Hippocampus Middle brain
24 chr2:99082600-99088400 Weak transcription Fetal Lung lung
25 chr2:99082600-99088600 Weak transcription Gastric stomach
26 chr2:99082600-99096200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr2:99083000-99085000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr2:99083000-99085600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr2:99083000-99086600 Weak transcription Adipose Nuclei Adipose
30 chr2:99083000-99087600 Weak transcription Pancreas Pancrea
31 chr2:99083000-99088400 Weak transcription Rectal Smooth Muscle rectum
32 chr2:99083000-99088400 Weak transcription Stomach Smooth Muscle stomach
33 chr2:99083000-99089600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr2:99083000-99091000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr2:99083200-99084800 Weak transcription Muscle Satellite Cultured Cells --
36 chr2:99083200-99085000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr2:99083200-99085000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:99083200-99085000 Weak transcription K562 blood
39 chr2:99083200-99085000 Weak transcription NH-A brain
40 chr2:99083200-99085200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:99083200-99085200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr2:99083200-99085800 Enhancers Primary mononuclear cells fromperipheralblood Blood
43 chr2:99083200-99086200 Weak transcription Fetal Stomach stomach
44 chr2:99083200-99086400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr2:99083200-99086400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:99083200-99090000 Enhancers Primary T cells fromperipheralblood blood
47 chr2:99083200-99091400 Weak transcription H1 Cell Line embryonic stem cell
48 chr2:99083200-99091400 Weak transcription HMEC breast
49 chr2:99083200-99091800 Weak transcription NHEK skin
50 chr2:99083200-99093000 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015