The 2.0 version of rSNPBase

Variant report

Variant rs3769730
Chromosome Location chr2:99101453-99101454
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99072600-99119600 Weak transcription Aorta Aorta
2 chr2:99090600-99107200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr2:99090800-99108000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr2:99092800-99101800 Enhancers Left Ventricle heart
5 chr2:99092800-99103400 Enhancers Lung lung
6 chr2:99094000-99107000 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr2:99094200-99101600 Enhancers Placenta Placenta
8 chr2:99094800-99103400 Enhancers H1 Cell Line embryonic stem cell
9 chr2:99095000-99107200 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr2:99096000-99106600 Enhancers Primary T helper 17 cells PMA-I stimulated --
11 chr2:99096400-99101600 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr2:99096800-99101800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr2:99096800-99103000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr2:99096800-99113600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:99097000-99103000 Weak transcription Osteobl bone
16 chr2:99097200-99101800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:99097200-99106800 Enhancers Primary T helper cells PMA-I stimulated --
18 chr2:99097400-99102000 Weak transcription Stomach Smooth Muscle stomach
19 chr2:99097400-99102400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:99097400-99104200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr2:99097400-99106800 Weak transcription Fetal Stomach stomach
22 chr2:99097400-99110400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:99097600-99101600 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr2:99097600-99102000 Enhancers Thymus Thymus
25 chr2:99097600-99103000 Weak transcription Fetal Muscle Trunk muscle
26 chr2:99097600-99104200 Weak transcription Brain Substantia Nigra brain
27 chr2:99097600-99104400 Weak transcription Brain Angular Gyrus brain
28 chr2:99097800-99104200 Weak transcription Adipose Nuclei Adipose
29 chr2:99097800-99104800 Weak transcription Fetal Muscle Leg muscle
30 chr2:99098000-99104200 Weak transcription Brain Hippocampus Middle brain
31 chr2:99098000-99104600 Weak transcription Psoas Muscle Psoas
32 chr2:99098000-99106800 Enhancers Primary T cells fromperipheralblood blood
33 chr2:99098200-99101600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr2:99098400-99102800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr2:99098400-99103600 Enhancers Fetal Thymus thymus
36 chr2:99098400-99115200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr2:99098800-99101600 Enhancers Esophagus oesophagus
38 chr2:99099000-99101600 Enhancers Gastric stomach
39 chr2:99099000-99101600 Enhancers Sigmoid Colon Sigmoid Colon
40 chr2:99099800-99101800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
41 chr2:99099800-99103200 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr2:99100000-99101600 Enhancers Colonic Mucosa Colon
43 chr2:99100000-99101600 Enhancers Stomach Mucosa stomach
44 chr2:99100000-99101800 Enhancers Rectal Mucosa Donor 29 rectum
45 chr2:99100000-99102000 Enhancers HepG2 liver
46 chr2:99100000-99102600 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr2:99100000-99103200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:99100000-99105200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr2:99100000-99111000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr2:99100200-99101600 Enhancers Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015