Variant report

Variant	rs3769708
Chromosome Location	chr2:99187650-99187651
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:99186248..99187775-chr2:99201467..99203434,2	MCF-7	breast:

Extended variants
information (count: 171 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:167)

rs_ID	r²[population]
rs10199199	0.81[EUR][1000 genomes]
rs10496327	0.90[CEU][hapmap];0.87[CHB][hapmap];0.84[JPT][hapmap];0.86[EUR][1000 genomes]
rs10514774	0.81[EUR][1000 genomes]
rs1139829	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11537554	0.95[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11884553	0.85[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11888595	0.86[EUR][1000 genomes]
rs11892744	0.81[CEU][hapmap];0.81[CHB][hapmap];0.84[EUR][1000 genomes]
rs11896729	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[YRI][hapmap];0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11901568	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11902825	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12052639	0.87[EUR][1000 genomes]
rs12617721	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12618524	0.93[CHB][hapmap];0.81[JPT][hapmap];0.89[YRI][hapmap];0.86[EUR][1000 genomes]
rs12618769	0.91[YRI][hapmap]
rs12619665	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12622341	0.86[EUR][1000 genomes]
rs13402379	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1516085	0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1587835	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.82[EUR][1000 genomes]
rs17031139	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17031146	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17031905	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17032120	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17032866	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17032870	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17033136	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17033813	1.00[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17034171	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17034241	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17444095	0.90[CEU][hapmap];0.88[CHB][hapmap];0.83[JPT][hapmap];0.86[EUR][1000 genomes]
rs17446058	0.95[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17502889	0.81[EUR][1000 genomes]
rs17504774	0.90[CEU][hapmap];0.88[CHB][hapmap];0.83[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17505088	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17505326	0.95[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17506535	0.95[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17513468	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1847550	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2230388	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2276603	0.95[CEU][hapmap];0.88[CHB][hapmap];0.88[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2278206	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2278207	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2278208	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2278211	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2278212	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2278213	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2278214	0.90[CEU][hapmap];0.88[CHB][hapmap];0.83[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2309390	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3203856	0.90[CEU][hapmap];0.81[CHB][hapmap];0.83[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34906456	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3729568	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3754871	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3754872	0.95[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3754875	0.95[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3754877	1.00[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3754878	1.00[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3754879	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3754880	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3754881	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3754883	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3754884	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3754885	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3754886	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3754888	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3754889	0.85[EUR][1000 genomes]
rs3754890	0.87[EUR][1000 genomes]
rs3754891	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3754892	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs3754893	0.83[EUR][1000 genomes]
rs3769697	0.91[YRI][hapmap]
rs3769698	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3769701	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3769709	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3769712	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3769713	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3769715	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769716	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769717	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769719	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3769723	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3769724	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769725	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3769726	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769727	1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3769728	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769729	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3769730	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3769733	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3769734	0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3769735	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3769736	0.87[EUR][1000 genomes]
rs3769737	0.90[CEU][hapmap];0.88[CHB][hapmap];0.83[JPT][hapmap];0.82[YRI][hapmap];0.87[EUR][1000 genomes]
rs3769738	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3769740	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3769741	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3769743	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3820941	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3820943	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3820945	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4596026	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4599165	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4850874	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4850875	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.86[EUR][1000 genomes]
rs4850876	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4850877	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4850878	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4850879	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4851131	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4851136	0.91[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.82[YRI][hapmap];0.84[EUR][1000 genomes]
rs4851138	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4851140	0.87[EUR][1000 genomes]
rs4851141	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4851142	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4851144	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4851145	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4851146	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55900716	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55934321	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56091613	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56118505	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56141907	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56197140	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56232707	0.81[EUR][1000 genomes]
rs56240302	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56333112	0.81[EUR][1000 genomes]
rs56357378	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs58778964	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61180742	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6542754	0.82[AMR][1000 genomes]
rs6728891	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6736755	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6753380	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6753515	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72819965	0.82[EUR][1000 genomes]
rs72819970	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72819971	0.82[EUR][1000 genomes]
rs72819972	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72819981	0.82[EUR][1000 genomes]
rs72819996	0.84[EUR][1000 genomes]
rs72820002	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72821904	0.87[EUR][1000 genomes]
rs72821907	0.87[EUR][1000 genomes]
rs72821908	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72821920	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72821924	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72821930	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72821939	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72821943	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72821946	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72821951	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72821955	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72821956	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72821965	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823788	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72823792	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823794	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823796	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72823801	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7560357	0.82[YRI][hapmap]
rs7562232	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7585747	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7585939	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7588254	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7593615	0.82[EUR][1000 genomes]
rs7595120	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs961242	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006328	chr2:98977192-99210376	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1013941	chr2:99116255-99317933	Weak transcription Strong transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv535834	chr2:99116255-99317933	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
4	esv3343385	chr2:99187070-99189868	Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:99147200-99200200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr2:99148400-99211200	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr2:99149000-99209800	Strong transcription	Primary monocytes fromperipheralblood	blood
4	chr2:99149000-99210800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr2:99149200-99210800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr2:99156400-99197000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:99158800-99190600	Strong transcription	Cortex derived primary cultured neurospheres	brain
8	chr2:99159800-99201600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
9	chr2:99163000-99215000	Weak transcription	HMEC	breast
10	chr2:99163800-99194000	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr2:99164400-99210800	Strong transcription	Primary neutrophils fromperipheralblood	blood
12	chr2:99167600-99193400	Weak transcription	Fetal Heart	heart
13	chr2:99168000-99205200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr2:99168400-99210400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr2:99168600-99197600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr2:99169400-99222600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr2:99173200-99205000	Strong transcription	Primary T cells from cord blood	blood
18	chr2:99173400-99204800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr2:99174000-99204000	Strong transcription	Primary T helper naive cells from peripheral blood	blood
20	chr2:99174600-99207800	Weak transcription	HUVEC	blood vessel
21	chr2:99176000-99205400	Strong transcription	Primary T helper cells fromperipheralblood	blood
22	chr2:99176200-99203400	Strong transcription	Primary T helper cells PMA-I stimulated	--
23	chr2:99176200-99210600	Strong transcription	Primary T cells fromperipheralblood	blood
24	chr2:99176400-99205200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
25	chr2:99177200-99190800	Strong transcription	Brain Anterior Caudate	brain
26	chr2:99177400-99201600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
27	chr2:99177400-99210800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr2:99177400-99213000	Weak transcription	NHDF-Ad	bronchial
29	chr2:99177400-99216200	Weak transcription	NH-A	brain
30	chr2:99177400-99221000	Weak transcription	Psoas Muscle	Psoas
31	chr2:99178200-99201400	Strong transcription	Fetal Stomach	stomach
32	chr2:99178600-99189800	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr2:99178600-99190600	Strong transcription	Primary T killer memory cells from peripheral blood	blood
34	chr2:99178800-99193800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr2:99178800-99201200	Strong transcription	Spleen	Spleen
36	chr2:99179200-99196600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr2:99179400-99190000	Strong transcription	HUES64 Cell Line	embryonic stem cell
38	chr2:99179400-99190400	Strong transcription	H1 Cell Line	embryonic stem cell
39	chr2:99179400-99190600	Strong transcription	HUES48 Cell Line	embryonic stem cell
40	chr2:99179400-99198600	Strong transcription	Fetal Intestine Small	intestine
41	chr2:99179400-99204200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr2:99179600-99190200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr2:99179600-99195400	Strong transcription	HUES6 Cell Line	embryonic stem cell
44	chr2:99179600-99195400	Strong transcription	Placenta	Placenta
45	chr2:99179600-99196800	Strong transcription	Liver	Liver
46	chr2:99179800-99190000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr2:99179800-99190200	Strong transcription	Colonic Mucosa	Colon
48	chr2:99179800-99190400	Strong transcription	Gastric	stomach
49	chr2:99179800-99190800	Strong transcription	Primary B cells from cord blood	blood
50	chr2:99179800-99191000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell

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